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Biomedical literature often uses complex language and inaccessible professional terminologies. That is why simplification plays an important role in improving public health literacy. Applying Natural Language Processing (NLP) models to…

计算与语言 · 计算机科学 2024-03-19 Zihao Li , Samuel Belkadi , Nicolo Micheletti , Lifeng Han , Matthew Shardlow , Goran Nenadic

This study presents a systematic comparison of three approaches for the analysis of mental health text using large language models (LLMs): prompt engineering, retrieval augmented generation (RAG), and fine-tuning. Using LLaMA 3, we evaluate…

计算与语言 · 计算机科学 2025-04-01 Arshia Kermani , Veronica Perez-Rosas , Vangelis Metsis

Despite the impressive capabilities of large language models (LLMs), their performance on information extraction tasks is still not entirely satisfactory. However, their remarkable rewriting capabilities and extensive world knowledge offer…

计算与语言 · 计算机科学 2024-02-23 Junjie Ye , Nuo Xu , Yikun Wang , Jie Zhou , Qi Zhang , Tao Gui , Xuanjing Huang

Large language models (LLMs) have demonstrated strong performance on medical benchmarks, including question answering and diagnosis. To enable their use in clinical settings, LLMs are typically further adapted through continued pretraining…

Europe's healthcare systems require enhanced interoperability and digitalization, driving a demand for innovative solutions to process legacy clinical data. This paper presents the results of our project, which aims to leverage Large…

计算与语言 · 计算机科学 2025-07-09 Aynur Guluzade , Naguib Heiba , Zeyd Boukhers , Florim Hamiti , Jahid Hasan Polash , Yehya Mohamad , Carlos A Velasco

Training a neural network-based biomedical named entity recognition (BioNER) model usually requires extensive and costly human annotations. While several studies have employed multi-task learning with multiple BioNER datasets to reduce…

计算与语言 · 计算机科学 2024-12-31 Yu Yin , Hyunjae Kim , Xiao Xiao , Chih Hsuan Wei , Jaewoo Kang , Zhiyong Lu , Hua Xu , Meng Fang , Qingyu Chen

The Segment Anything Model (SAM) has demonstrated remarkable capabilities of scaled-up segmentation models, enabling zero-shot generalization across a variety of domains. By leveraging large-scale foundational models as pre-trained models,…

计算机视觉与模式识别 · 计算机科学 2023-08-29 Weijia Feng , Lingting Zhu , Lequan Yu

In this work, we study the problem of named entity recognition (NER) in a low resource scenario, focusing on few-shot and zero-shot settings. Built upon large-scale pre-trained language models, we propose a novel NER framework, namely…

计算与语言 · 计算机科学 2021-09-14 Yaqing Wang , Haoda Chu , Chao Zhang , Jing Gao

Several recent works seek to adapt general-purpose large language models (LLMs) and vision-language models (VLMs) for medical applications through continued pretraining on publicly available biomedical corpora. These works typically claim…

计算与语言 · 计算机科学 2025-07-01 Daniel P. Jeong , Pranav Mani , Saurabh Garg , Zachary C. Lipton , Michael Oberst

Clinical named entity recognition from dental progress notes is challenging because documentation is highly unstructured, domain-specific, and often privacy-sensitive. We developed a locally deployable framework that enables small language…

Despite the huge and continuous advances in computational linguistics, the lack of annotated data for Named Entity Recognition (NER) is still a challenging issue, especially in low-resource languages and when domain knowledge is required…

计算与语言 · 计算机科学 2021-11-25 Valerio La Gatta , Vincenzo Moscato , Marco Postiglione , Giancarlo Sperlì

Biomedical triple extraction systems aim to automatically extract biomedical entities and relations between entities. The exploration of applying large language models (LLM) to triple extraction is still relatively unexplored. In this work,…

计算与语言 · 计算机科学 2024-04-30 Mingchen Li , Huixue Zhou , Rui Zhang

Large language models (LLMs) are increasingly recognized as valuable tools across the medical environment, supporting clinical, research, and administrative workflows. However, strict privacy and network security regulations in hospital…

计算与语言 · 计算机科学 2026-01-09 Seokhwan Ko , Donghyeon Lee , Jaewoo Chun , Hyungsoo Han , Junghwan Cho

Recent advances in instruction-tuned Large Vision-Language Models (LVLMs) have imbued the models with the ability to generate high-level, image-grounded explanations with ease. While such capability is largely attributed to the rich world…

计算机视觉与模式识别 · 计算机科学 2025-01-08 Jeonghwan Kim , Heng Ji

Recently, Large Language Models (LLM) have demonstrated impressive capability to solve a wide range of tasks. However, despite their success across various tasks, no prior work has investigated their capability in the biomedical domain yet.…

计算与语言 · 计算机科学 2024-02-21 Israt Jahan , Md Tahmid Rahman Laskar , Chun Peng , Jimmy Huang

Large Language Models (LLMs), particularly those similar to ChatGPT, have significantly influenced the field of Natural Language Processing (NLP). While these models excel in general language tasks, their performance in domain-specific…

计算与语言 · 计算机科学 2024-01-02 Omid Rohanian , Mohammadmahdi Nouriborji , David A. Clifton

Systematic reviews are crucial for evidence-based medicine as they comprehensively analyse published research findings on specific questions. Conducting such reviews is often resource- and time-intensive, especially in the screening phase,…

信息检索 · 计算机科学 2024-02-02 Shuai Wang , Harrisen Scells , Shengyao Zhuang , Martin Potthast , Bevan Koopman , Guido Zuccon

This research paper investigates the application of Large Language Models (LLMs) in healthcare, specifically focusing on enhancing medical decision support through Retrieval-Augmented Generation (RAG) integrated with hospital-specific data…

计算与语言 · 计算机科学 2025-05-07 Mohammad Shoaib Ansari , Mohd Sohail Ali Khan , Shubham Revankar , Aditya Varma , Anil S. Mokhade

Large Language Models (LLMs) have shown strong performance in text-based healthcare tasks. However, their utility in image-based applications remains unexplored. We investigate the effectiveness of LLMs for medical imaging tasks,…

计算机视觉与模式识别 · 计算机科学 2025-09-16 Felicia Liu , Jay J. Yoo , Farzad Khalvati

Automated analysis of clinical notes is attracting increasing attention. However, there has not been much work on medical term abbreviation disambiguation. Such abbreviations are abundant, and highly ambiguous, in clinical documents. One of…

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