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Purpose: In the present work we describe the correction of diffusion-weighted MRI for site and scanner biases using a novel method based on invariant representation. Theory and Methods: Pooled imaging data from multiple sources are subject…

定量方法 · 定量生物学 2020-02-04 Daniel Moyer , Greg Ver Steeg , Chantal M. W. Tax , Paul M. Thompson

Diffusion magnetic resonance imaging (dMRI) is a relatively modern technique used to study tissue microstructure in a non-invasive way. Non-Gaussian diffusion representation is related to the restricted diffusion and can provide information…

信号处理 · 电气工程与系统科学 2020-09-17 Tomasz Pieciak , Maryam Afzali , Fabian Bogusz , Aja-Fernández , Derek K. Jones

Magnetic Resonance Imaging (MRI) is a powerful medical imaging modality, but unfortunately suffers from long scan times which, aside from increasing operational costs, can lead to image artifacts due to patient motion. Motion during the…

图像与视频处理 · 电气工程与系统科学 2023-10-02 Brett Levac , Sidharth Kumar , Ajil Jalal , Jonathan I. Tamir

Magnetic Resonance Imaging (MRI) produces excellent soft tissue contrast, albeit it is an inherently slow imaging modality. Promising deep learning methods have recently been proposed to reconstruct accelerated MRI scans. However, existing…

图像与视频处理 · 电气工程与系统科学 2024-04-17 Yilmaz Korkmaz , Tolga Cukur , Vishal M. Patel

Prior work on the Image Quality Transfer on Diffusion MRI (dMRI) has shown significant improvement over traditional interpolation methods. However, the difficulty in obtaining ultra-high resolution Diffusion MRI scans poses a problem in…

As the deep learning revolution marches on, masked modeling has emerged as a distinctive approach that involves predicting parts of the original data that are proportionally masked during training, and has demonstrated exceptional…

图像与视频处理 · 电气工程与系统科学 2025-06-25 Qinrong Cai , Yu Guan , Zhibo Chen , Dong Liang , Qiuyun Fan , Qiegen Liu

We develop a general analytical and numerical framework for estimating intra- and extra-neurite water fractions and diffusion coefficients, as well as neurite orientational dispersion, in each imaging voxel. By employing a set of rotational…

生物物理 · 物理学 2018-04-10 Dmitry S. Novikov , Jelle Veraart , Ileana O. Jelescu , Els Fieremans

Rotary Position Embedding (RoPE) is the de facto positional encoding in large language models due to its ability to encode relative positions and support length extrapolation. When adapted to vision transformers, the standard axial…

计算机视觉与模式识别 · 计算机科学 2026-02-04 Haoyu Liu , Sucheng Ren , Tingyu Zhu , Peng Wang , Cihang Xie , Alan Yuille , Zeyu Zheng , Feng Wang

Diffusion MRI (dMRI) is the primary imaging modality used to study brain microstructure in vivo. Reliable and computationally efficient parameter inference for common dMRI biophysical models is a challenging inverse problem, due to factors…

图像与视频处理 · 电气工程与系统科学 2025-03-03 William Consagra , Lipeng Ning , Yogesh Rathi

Diffusion magnetic resonance imaging is a noninvasive imaging technique that can indirectly infer the microstructure of tissues and provide metrics which are subject to normal variability across subjects. Potentially abnormal values or…

图像与视频处理 · 电气工程与系统科学 2020-08-28 Samuel St-Jean , Max A. Viergever , Alexander Leemans

Diffusion-encoded magnetic resonance (MR) experiments can provide important insights into the microstructural characteristics of a variety of biological tissues and other fluid- or gas-filled porous media. The physics of diffusion encoding…

医学物理 · 物理学 2021-09-30 Justin P. Haldar

Magnetic resonance imaging (MRI) is a vital diagnostic tool, but its inherently long acquisition times reduce clinical efficiency and patient comfort. Recent advancements in deep learning, particularly diffusion models, have improved…

图像与视频处理 · 电气工程与系统科学 2026-04-28 Yuxuan Zhang , Jinkui Hao , Bo Zhou

Magnetic Resonance Imaging (MRI) is a crucial diagnostic tool, but high-resolution scans are often slow and expensive due to extensive data acquisition requirements. Traditional MRI reconstruction methods aim to expedite this process by…

图像与视频处理 · 电气工程与系统科学 2025-11-11 Emmanuelle Bourigault , Abdullah Hamdi , Amir Jamaludin

Deep learning has emerged as a promising approach for learning the nonlinear mapping between diffusion-weighted MR images and tissue parameters, which enables automatic and deep understanding of the brain microstructures. However, the…

计算机视觉与模式识别 · 计算机科学 2025-05-21 Wenxin Fan , Jian Cheng , Qiyuan Tian , Ruoyou Wu , Juan Zou , Zan Chen , Shanshan Wang

Diffusion MRI is a non-invasive, in-vivo biomedical imaging method for mapping tissue microstructure. Applications include structural connectivity imaging of the human brain and detecting microstructural neural changes. However, acquiring…

图像与视频处理 · 电气工程与系统科学 2023-10-09 Amir Sadikov , Xinlei Pan , Hannah Choi , Lanya T. Cai , Pratik Mukherjee

Magnetic Resonance Imaging generally requires long exposure times, while being sensitive to patient motion, resulting in artifacts in the acquired images, which may hinder their diagnostic relevance. Despite research efforts to decrease the…

图像与视频处理 · 电气工程与系统科学 2025-02-04 Paolo Angella , Vito Paolo Pastore , Matteo Santacesaria

Diffusion Magnetic Resonance Imaging (dMRI) plays a crucial role in the noninvasive investigation of tissue microstructural properties and structural connectivity in the \textit{in vivo} human brain. However, to effectively capture the…

计算机视觉与模式识别 · 计算机科学 2024-01-04 Jing Yang , Jian Cheng , Cheng Li , Wenxin Fan , Juan Zou , Ruoyou Wu , Shanshan Wang

The purpose of this study is to present and compare three denoising diffusion probabilistic models (DDPMs) that generate 3D $T_1$-weighted MRI human brain images. Three DDPMs were trained using 80,675 image volumes from 42,406 subjects…

图像与视频处理 · 电气工程与系统科学 2025-11-03 Samuel W. Remedios , Aaron Carass , Jerry L. Prince , Blake E. Dewey

Decoding visual experiences from fMRI offers a powerful avenue to understand human perception and develop advanced brain-computer interfaces. However, current progress often prioritizes maximizing reconstruction fidelity while overlooking…

机器学习 · 计算机科学 2025-10-09 Yuxiang Wei , Yanteng Zhang , Xi Xiao , Tianyang Wang , Xiao Wang , Vince D. Calhoun

Learning-based approaches, especially those based on deep networks, have enabled high-quality estimation of tissue microstructure from low-quality diffusion magnetic resonance imaging (dMRI) scans, which are acquired with a limited number…

图像与视频处理 · 电气工程与系统科学 2019-10-25 Yu Qin , Yuxing Li , Zhiwen Liu , Chuyang Ye