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相关论文: Locally tuned hydrodynamics of active polymer chai…

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We perform numerical simulations of isolated, partially active polymers, driven out-of-equilibrium by a fraction of their monomers. We show that, if the active beads are all gathered in a contiguous block, the position of the section along…

软凝聚态物质 · 物理学 2023-09-04 Marin Vatin , Sumanta Kundu , Emanuele Locatelli

We study how hydrodynamic interactions affect the collective behaviour of active particles suspended in a fluid at high concentrations, with particular attention to lubrication forces which appear when the particles are very close to one…

软凝聚态物质 · 物理学 2018-05-29 Natsuhiko Yoshinaga , Tanniemola B. Liverpool

We make use of the previously developed formalism for a monomer ensemble and include angular dependence of the segments of the polymer chains thus described. In particular we show how to deal with stiffness when the polymer chain is…

软凝聚态物质 · 物理学 2015-06-24 K. K. Muller-Nedebock , H. L. Frisch , J. K. Percus

Synthetic copolymers and biopolymers, such as polypeptides and double-stranded DNA, often exhibit strong variations in bending stiffness along their contour, which can significantly impact conformational behavior at larger scales. To…

软凝聚态物质 · 物理学 2025-11-04 Yannick Witzky , Friederike Schmid , Arash Nikoubashman

The conformational and dynamical properties of active Brownian polymers embedded in a fluid depend on the nature of the driving mechanism, e.g., self-propulsion or external actuation of the monomers. Implementations of self-propelled and…

软凝聚态物质 · 物理学 2022-01-24 Judit Clopés Llahí , Aitor Martín-Gómez , Gerhard Gompper , Roland G. Winkler

We study the swelling of a flexible linear chain composed of active particles by analytical theory and computer simulation. Three different situations are considered: a free chain, a chain confined to an external harmonic trap, and a chain…

软凝聚态物质 · 物理学 2015-03-31 Andreas Kaiser , Sonja Babel , Borge ten Hagen , Christian von Ferber , Hartmut Löwen

We report a numerical study of the diffusiophoresis of short polymers using non-equilibrium molecular dynamics simulations. More precisely, we consider polymer chains in a fluid containing a solute which has a concentration gradient, and…

软凝聚态物质 · 物理学 2020-05-20 Simón Ramírez-Hinestrosa , Hiroaki Yoshida , Lydéric Bocquet , Daan Frenkel

We construct a micromechanical version of an early model for topologically constrained polymers -- a 2D chain amongst point-like uncrossable obstacles -- which allows us to explicitly elucidate the role of topological forces beyond…

软凝聚态物质 · 物理学 2022-07-13 Ahmad K. Omar , Yuyuan Lu , Lijia An , Zhen-Gang Wang

We describe the large-scale collective behavior of solutions of polar biofilaments and both stationary and mobile crosslinkers. Both mobile and stationary crosslinkers induce filament alignment promoting either polar or nematic order. In…

软凝聚态物质 · 物理学 2009-11-11 Aphrodite Ahmadi , M. Cristina Marchetti , T. B. Liverpool

Hydrodynamic forces may significantly affect the motion of polymers. In sheet-like cavities, such as the cell's cytoplasm and microfluidic channels, the hydrodynamic forces are long-range. It is therefore expected that that hydrodynamic…

软凝聚态物质 · 物理学 2010-08-04 Tsvi Tlusty

We investigate the conformational and dynamical properties of a partially active Rouse chain, where activity is localized within a specific segment, positioned at various locations along the chain and spanning any given length. Through…

软凝聚态物质 · 物理学 2024-12-06 Koushik Goswami , Norman Hsia , Cheng-Hung Chang , Hong-Yan Shih

In this work we study the assisted translocation of a polymer across a membrane nanopore, inside which a molecular motor exerts a force fuelled by the hydrolysis of ATP molecules. In our model the motor switches to its active state for a…

软凝聚态物质 · 物理学 2018-03-26 A. Fiasconaro , J. J. Mazo , F. Falo

It is common to study polymer physics through the use of idealized single-chain models, and the most popular of these is the freely jointed chain model. In certain thermodynamic ensembles, statistical mechanical treatment of this model is…

统计力学 · 物理学 2026-04-14 Michael R. Buche , Alvin Chen

Ring polymers are an intriguing class of polymers with unique physical properties, and understanding their behavior is important for developing accurate theoretical models. In this study, we investigate the effect of chain stiffness and…

软凝聚态物质 · 物理学 2023-08-24 Shota Goto , Kang Kim , Nobuyuki Matubayasi

We study the role of hydrodynamic interactions in the collective behaviour of collections of microscopic active particles suspended in a fluid. We introduce a novel calculational framework that allows us to separate the different…

软凝聚态物质 · 物理学 2017-09-06 Natsuhiko Yoshinaga , Tanniemola B. Liverpool

Local chain structure and local environment play an important role in the dynamics of polymer chains in miscible blends. In general, the friction coefficients that describe the segmental dynamics of the two components in a blend differ from…

软凝聚态物质 · 物理学 2009-11-11 Jutta Luettmer-Strathmann , Manjeera Mantina

The characterization of the interactions between two fully flexible self-avoiding polymers is one of the classic and most important problems in polymer physics. In this paper we measure these interactions in the presence of active…

软凝聚态物质 · 物理学 2022-04-06 M. C. Gandikota , A. Cacciuto

Chain molecules play important roles in industry and in living cells. Our focus here is on distinct ways of modeling the stiffness inherent in a chain molecule. We consider three types of stiffnesses -- one yielding an energy penalty for…

软凝聚态物质 · 物理学 2019-11-12 Tatjana Skrbic , Jayanth R. Banavar , Achille Giacometti

We study the relaxation dynamics of a coarse-grained polymer chain at different degrees of stretching by both analytical means and numerical simulations. The macromolecule is modelled as a string of beads, connected by anharmonic springs,…

软凝聚态物质 · 物理学 2009-11-13 M. Febbo , A. Milchev , V. Rostiashvili , T. A. Vilgis , D. Dimitrov

The shape of a polymer plays an important role in determining its interactions with other molecules and with the environment, and is in turn affected by both of them. As a consequence, in the literature the shape properties of a chain in…

软凝聚态物质 · 物理学 2017-07-26 Alberto S. Sassi , Salvatore Assenza , Paolo De Los Rios