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相关论文: Limitations to Chemotactic Concentration Sensing d…

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Living cells often need to measure chemical concentrations that vary in time. To this end, they deploy many resources, e.g. receptors, downstream signaling molecules, time and energy. Here, we present a theory for the optimal design of a…

分子网络 · 定量生物学 2019-02-26 G. Malaguti , P. R. ten Wolde

Biological cells are able to accurately sense chemicals with receptors at their surfaces, allowing cells to move towards sources of attractant and away from sources of repellent. The accuracy of sensing chemical concentration is ultimately…

亚细胞过程 · 定量生物学 2015-05-14 Robert G. Endres , Ned S. Wingreen

The evolution of multicellular organisms from monocellular ancestors represents one of the greatest advances of the history of life. The assembly of such multicellular organisms requires signalling and response between cells: over millions…

细胞行为 · 定量生物学 2007-05-23 Graeme J. Ackland , Richard D. L. Hanes , Morrel H. Cohen

Microorganisms like bacteria can sense concentration of chemo-attractants in its medium very accurately. They achieve this through interaction between the receptors on their cell surface and the chemo-attractant molecules (like sugar). But…

软凝聚态物质 · 物理学 2015-06-04 Surya K. Ghosh , Tapanendu Kundu , Anirban Sain

Collective oscillation of cells in a population has been reported under diverse biological contexts and with vastly different molecular constructs. Could there be common principles similar to those that govern spontaneous oscillation in…

细胞行为 · 定量生物学 2019-07-08 Shou-Wen Wang , Lei-Han Tang

Metastasis is a process of cell migration that can be collective and guided by chemical cues. Viewing metastasis in this way, as a physical phenomenon, allows one to draw upon insights from other studies of collective sensing and migration…

生物物理 · 物理学 2016-03-10 Julien Varennes , Andrew Mugler

Bacterial chemotaxis is controlled by the signalling of a cluster of receptors. A cooperative model is presented, in which coupling between neighbouring receptor dimers enhances the sensitivity with which stimuli can be detected, without…

生物物理 · 物理学 2009-10-31 Yu Shi , Thomas Duke

Apoptosis, or genetically programmed cell death, is a crucial cellular process that maintains the balance between life and death in cells. The precise molecular mechanism of apoptosis signaling and how these two pathways are differentially…

分子网络 · 定量生物学 2009-02-06 S. Raychaudhuri , E. Willgohs , T. Nguyen , E. M. Khan , T. Goldkorn

A large number of eukaryotic cells are able to directly detect external chemical gradients with great accuracy and the ultimate limit to their sensitivity has been a topic of debate for many years. Previous work has been done to understand…

细胞行为 · 定量生物学 2015-05-20 Stuart A. Sevier , Herbert Levine

Cells use biochemical networks to translate environmental information into intracellular responses. These responses can be highly dynamic, but how the information is encoded in these dynamics remains poorly understood. Here we investigate…

细胞行为 · 定量生物学 2017-04-05 Garrett D. Potter , Tommy A. Byrd , Andrew Mugler , Bo Sun

The signaling apparatus mediating bacterial chemotaxis can adapt to a wide range of persistent external stimuli. In many cases, the bacterial activity returns to its pre-stimulus level exactly and this "perfect adaptability" is robust…

生物物理 · 物理学 2017-10-16 Bernardo A. Mello , Yuhai Tu

Dictyostelium discoideum (D.d.) is a widely studied amoeba due to its capabilities of development, survival, and self-organization. During aggregation it produces and relays a chemical signal (cAMP) which shows spirals and target centers.…

斑图形成与孤子 · 物理学 2019-04-05 Estefania Vidal-Henriquez , Azam Gholami

In many sensory systems, transmembrane receptors are spatially organized in large clusters. Such arrangement may facilitate signal amplification and the integration of multiple stimuli. However, this organization likely also affects the…

分子网络 · 定量生物学 2014-03-05 William Pontius , Michael W. Sneddon , Thierry Emonet

Cells use surface receptors to estimate the concentration of external ligands. Limits on the accuracy of such estimations have been well studied for pairs of ligand and receptor species. However, the environment typically contains many…

分子网络 · 定量生物学 2015-06-02 Vijay Singh , Ilya Nemenman

Biological cells estimate concentration gradients of signaling molecules with a precision that is limited not only by sensing noise, but additionally by the cell's own stochastic motion. We ask for the theoretical limits of gradient…

生物物理 · 物理学 2021-05-26 Maja Novak , Benjamin M. Friedrich

Cells continuously probe their environment with membrane receptors, achieving subsecond adaptation of their behaviour [1-3]. Recently, several receptors, including cadherins, were found to bind ligands with a lifetime of order of one…

Chemotactic cells of eukaryotic organisms are able to accurately sense shallow chemical concentration gradients using cell-surface receptors. This sensing ability is remarkable as cells must be able to spatially resolve small fractional…

细胞行为 · 定量生物学 2009-06-22 Robert G. Endres , Ned S. Wingreen

Cells sense external concentrations and, via biochemical signaling, respond by regulating the expression of target proteins. Both in signaling networks and gene regulation there are two main mechanisms by which the concentration can be…

亚细胞过程 · 定量生物学 2017-04-12 Gabriele Micali , Gerardo Aquino , David M. Richards , Robert G. Endres

Inputs to signaling pathways can have complex statistics that depend on the environment and on the behavioral response to previous stimuli. Such behavioral feedback is particularly important in navigation. Successful navigation relies on…

分子网络 · 定量生物学 2014-12-02 Yann S. Dufour , Xiongfei Fu , Luis Hernandez-Nunez , Thierry Emonet

Cells are constantly exposed to fluctuating environmental conditions. External signals are sensed, processed and integrated by cellular signal transduction networks, which translate input signals into specific cellular responses by means of…

分子网络 · 定量生物学 2012-05-29 Pau Rué , Núria Domedel-Puig , Jordi Garcia-Ojalvo , Antonio J. Pons