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Flexible canopy flows are often encountered in natural scenarios, e.g., when crops sway in the wind or when submerged kelp forests are agitated by marine currents. Here, we provide a detailed characterisation of the turbulent flow developed…

流体动力学 · 物理学 2024-12-31 Giulio Foggi Rota , Alessandro Monti , Stefano Olivieri , Marco Edoardo Rosti

Active solids such as cell collectives, colloidal clusters, and active metamaterials exhibit diverse collective phenomena, ranging from rigid body motion to shape-changing mechanisms. The nonlinear dynamics of such active materials remains…

软凝聚态物质 · 物理学 2024-06-21 Claudio Hernández-López , Paul Baconnier , Corentin Coulais , Olivier Dauchot , Gustavo Düring

Perturbations of fluid media can give rise to non-equilibrium dynamics, which may in turn cause motion of immersed inclusions. We consider perturbations ("activations") that are local in space and time, of a fluid density which is…

统计力学 · 物理学 2020-03-18 Christian M. Rohwer , Mehran Kardar , Matthias Krüger

Dynamics is central to living systems. In the last two decades, experiments have revealed that the dynamics in diverse biological systems - from intracellular cytoplasm to cellular and organismal aggregates - are remarkably similar to that…

软凝聚态物质 · 物理学 2024-03-12 Souvik Sadhukhan , Subhodeep Dey , Smarajit Karmakar , Saroj Kumar Nandi

The eukaryotic cell's cytoskeleton is a prototypical example of an active material: objects embedded within it are driven by molecular motors acting on the cytoskeleton, leading to anomalous diffusive behavior. Experiments tracking the…

软凝聚态物质 · 物理学 2021-11-12 Daniel W. Swartz , Brian A. Camley

Cooperative binding affects many processes in biology, but it is commonly addressed only in equilibrium. In this work we explore dynamical cooperativity in driven systems, where the cooperation occurs because some of the bonds change the…

生物物理 · 物理学 2015-05-13 Jørgen Kjoshagen Trømborg , Alfredo Alexander-Katz

The dynamics of a flexible filament sedimenting in a viscous fluid are explored analytically and numerically. Compared to the well-studied case of sedimenting rigid rods, the introduction of filament compliance is shown to cause a…

流体动力学 · 物理学 2013-11-04 Lei Li , Harishankar Manikantan , David Saintillan , Saverio E. Spagnolie

Movements of molecular motors on cytoskeletal filaments are described by directed walks on a line. Detachment from this line is allowed to occur with a small probability. Motion in the surrounding fluid is described by symmetric random…

统计力学 · 物理学 2007-05-23 Theo M. Nieuwenhuizen , Stefan Klumpp , Reinhard Lipowsky

We discuss a two-dimensional model for the dynamics of axonemal deformations driven by internally generated forces of molecular motors. Our model consists of an elastic filament pair connected by active elements. We derive the dynamic…

生物物理 · 物理学 2009-11-06 Sebastien Camalet , Frank Julicher

Essentially all biology is active and dynamic. Biological entities autonomously sense, com- pute, and respond using energy-coupled ratchets that can produce force and do work. The cytoskeleton, along with its associated proteins and motors,…

软凝聚态物质 · 物理学 2017-03-28 Kasimira T. Stanhope , Vikrant Yadav , Christian D. Santangelo , Jennifer L. Ross

We study the behaviour at tipping points close to (smoothed) non-smooth fold bifurcations in one-dimensional oscillatory forced systems. The focus is the Stommel-Box, and related climate models, which are piecewise-smooth continuous…

动力系统 · 数学 2023-05-18 Chris Budd , Rachel Kuske

We discuss a theoretical model for bidirectional cargo transport in biological cells, which is driven by teams of molecular motors and subject to thermal fluctuations. The model describes explicitly the directed motion of the molecular…

生物物理 · 物理学 2017-09-20 Sarah Klein , Cécile Appert-Rolland , Ludger Santen

Cytoskeletal networks are the main actuators of cellular mechanics, and a foundational example for active matter physics. In cytoskeletal networks, motion is generated on small scales by filaments that push and pull on each other via…

软凝聚态物质 · 物理学 2022-10-05 Sebastian Fürthauer , Michael J. Shelley

Motivated by studies suggesting that the patterns exhibited by the collectively expanding fronts of thin cells during the closing of a wound [Mark et al., Biophys. J., 98:361-370, 2010] and the shapes of single cells crawling on surfaces…

软凝聚态物质 · 物理学 2018-03-14 Amarender Nagilla , Ranganathan Prabhakar , Sameer Jadhav

Fiberboids are active filaments trapped at the interface of two phases, able of harnessing energy (and matter) fluxes across the interface in order to produce a rolling-like self-propulsion. We discuss several table-top examples and develop…

软凝聚态物质 · 物理学 2020-05-19 Antony Bazir , Arthur Baumann , Falko Ziebert , Igor M. Kulic

The production of mechanical stresses in living organisms largely relies on localized, force-generating active units embedded in filamentous matrices. Numerical simulations of discrete fiber networks with fixed boundaries have shown that…

生物物理 · 物理学 2018-05-10 Pierre Ronceray , Chase Broedersz , Martin Lenz

The cytoplasm and biomembranes in biological cells contain large numbers of proteins that cyclically change their shapes. They are molecular machines that can function as molecular motors or carry out many other tasks in the cell. We…

软凝聚态物质 · 物理学 2016-02-17 Alexander Mikhailov , Raymond Kapral

This paper considers the interaction between two droplets placed on a substrate in immediate vicinity. We show here that when the two droplets are of different fluids and especially when one of the droplet is highly volatile, a wealth of…

流体动力学 · 物理学 2015-06-11 Mathieu Sellier , Volker Nock , Cécile Gaubert , Claude Verdier

Phase separating systems that are maintained away from thermodynamic equilibrium via molecular processes represent a class of active systems, which we call active emulsions. These systems are driven by external energy input for example…

软凝聚态物质 · 物理学 2019-06-07 Christoph A. Weber , David Zwicker , Frank Jülicher , Chiu Fan Lee

We present the results of smoothed particle hydrodynamic simulations investigating the evolution and fragmentation of filaments that are accreting from a turbulent medium. We show that the presence of turbulence, and the resulting…

星系天体物理 · 物理学 2017-04-19 S. D. Clarke , A. P. Whitworth , A. Duarte-Cabral , D. A. Hubber