相关论文: Abundance-Aware Set Transformer for Microbiome Sam…

The widespread adoption of large language models (LLMs) across industries has increased the demand for high-quality and customizable outputs. However, traditional alignment methods often require retraining large pretrained models, making it…

The use of generative artificial intelligence (AI) models is becoming ubiquitous in many fields. Though progress continues to be made, general purpose large language AI models (LLM) show a tendency to deliver creative answers, often called…

Biological multimodal large language models (MLLMs) have emerged as powerful foundation models for scientific discovery. However, existing models are specialized to a single modality, limiting their ability to solve inherently cross-modal…

A variety of contextualised language models have been proposed in the NLP community, which are trained on diverse corpora to produce numerous Neural Language Models (NLMs). However, different NLMs have reported different levels of…

Embedding fusion has emerged as an effective approach for enhancing performance across various NLP tasks. However, systematic guidelines for selecting optimal layers and developing effective fusion strategies for the integration of LLMs…

Fine-tuning Pre-trained protein language models (PLMs) has emerged as a prominent strategy for enhancing downstream prediction tasks, often outperforming traditional supervised learning approaches. As a widely applied powerful technique in…

Embedders play a central role in machine learning, projecting any object into numerical representations that can, in turn, be leveraged to perform various downstream tasks. The evaluation of embedding models typically depends on…

Most existing set encoding algorithms operate under the implicit assumption that all the set elements are accessible, and that there are ample computational and memory resources to load the set into memory during training and inference.…

Pre-trained transformer models shine in many natural language processing tasks and therefore are expected to bear the representation of the input sentence or text meaning. These sentence-level embeddings are also important in…

Large Language Models (LLMs) increasingly incorporate multilingual capabilities, fueling the demand to transfer them into target language-specific models. However, most approaches, which blend the source model's embedding by replacing the…

Next to scaling considerations, architectural design choices profoundly shape the solution space of transformers. In this work, we analyze the solutions simple transformer blocks implement when tackling the histogram task: counting items in…

Synthetic Data Generation (SDG), leveraging Large Language Models (LLMs), has recently been recognized and broadly adopted as an effective approach to improve the performance of smaller but more resource and compute efficient LLMs through…

Deep models are designed to operate on huge volumes of high dimensional data such as images. In order to reduce the volume of data these models must process, we propose a set-based two-stage end-to-end neural subsampling model that is…

Recently, self-attention based models have achieved state-of-the-art performance in sequential recommendation task. Following the custom from language processing, most of these models rely on a simple positional embedding to exploit the…

Transformer architectures achieve state-of-the-art performance across a wide range of pattern recognition and natural language processing tasks, but their scaling is accompanied by substantial parameter growth and redundancy in the…

Machine learning (ML)-based interatomic potentials are currently garnering a lot of attention as they strive to achieve the accuracy of electronic structure methods at the computational cost of empirical potentials. Given their generic…

By creating networks of biochemical pathways, communities of micro-organisms are able to modulate the properties of their environment and even the metabolic processes within their hosts. Next-generation high-throughput sequencing has led to…

Recommender systems have become an essential component of many online platforms, providing personalized recommendations to users. A crucial aspect is embedding techniques that convert the high-dimensional discrete features, such as user and…

Transformers have become the dominant architecture for sequence modeling tasks such as natural language processing or audio processing, and they are now even considered for tasks that are not naturally sequential such as image…

Labeled sequence transduction is a task of transforming one sequence into another sequence that satisfies desiderata specified by a set of labels. In this paper we propose multi-space variational encoder-decoders, a new model for labeled…