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相关论文: BioAnalyst: A Foundation Model for Biodiversity

200 篇论文

Taxonomic classification in biodiversity research involves organizing biological specimens into structured hierarchies based on evidence, which can come from multiple modalities such as images and genetic information. We investigate whether…

The fast simulation of dynamical systems is a key challenge in many scientific and engineering applications, such as weather forecasting, disease control, and drug discovery. With the recent success of deep learning, there is increasing…

机器学习 · 计算机科学 2024-10-02 Zezheng Song , Jiaxin Yuan , Haizhao Yang

Foundation models, often pre-trained with large-scale data, have achieved paramount success in jump-starting various vision and language applications. Recent advances further enable adapting foundation models in downstream tasks efficiently…

计算机视觉与模式识别 · 计算机科学 2023-06-19 Dequan Wang , Xiaosong Wang , Lilong Wang , Mengzhang Li , Qian Da , Xiaoqiang Liu , Xiangyu Gao , Jun Shen , Junjun He , Tian Shen , Qi Duan , Jie Zhao , Kang Li , Yu Qiao , Shaoting Zhang

The innovative application of precise geospatial vegetation forecasting holds immense potential across diverse sectors, including agriculture, forestry, humanitarian aid, and carbon accounting. To leverage the vast availability of satellite…

The modeling of environmental ecosystems plays a pivotal role in the sustainable management of our planet. Accurate prediction of key environmental variables over space and time can aid in informed policy and decision-making, thus improving…

计算与语言 · 计算机科学 2024-08-13 Haoran Li , Junqi Liu , Zexian Wang , Shiyuan Luo , Xiaowei Jia , Huaxiu Yao

With the exacerbation of the biodiversity and climate crises, macroecological pursuits such as global biodiversity mapping become more urgent. Remote sensing offers a wealth of Earth observation data for ecological studies, but the scarcity…

计算机视觉与模式识别 · 计算机科学 2025-10-21 Elena Plekhanova , Damien Robert , Johannes Dollinger , Emilia Arens , Philipp Brun , Jan Dirk Wegner , Niklaus Zimmermann

Recent advances in Foundation Models for Materials Science are poised to revolutionize the discovery, manufacture, and design of novel materials with tailored properties and responses. Although great strides have been made, successes have…

机器学习 · 计算机科学 2025-06-16 Michael Buzzy , Andreas Robertson , Peng Chen , Surya Kalidindi

Foundation models hold promise for specialized medical imaging tasks, though their effectiveness in breast imaging remains underexplored. This study leverages BiomedCLIP as a foundation model to address challenges in model generalization.…

Fossil-based palaeoclimate reconstruction is an important area of ecological science that has gained momentum in the backdrop of the global climate change debate. The hierarchical Bayesian paradigm provides an interesting platform for…

应用统计 · 统计学 2013-12-13 Sabyasachi Mukhopadhyay , Sourabh Bhattacharya

Large pre-trained models, also known as foundation models (FMs), are trained in a task-agnostic manner on large-scale data and can be adapted to a wide range of downstream tasks by fine-tuning, few-shot, or even zero-shot learning. Despite…

Foundational models have emerged as powerful tools for addressing various tasks in clinical settings. However, their potential development to breast ultrasound analysis remains untapped. In this paper, we present BUSGen, the first…

Cancer research is increasingly driven by the integration of diverse data modalities, spanning from genomics and proteomics to imaging and clinical factors. However, extracting actionable insights from these vast and heterogeneous datasets…

Modeling biological sequences such as DNA, RNA, and proteins is crucial for understanding complex processes like gene regulation and protein synthesis. However, most current models either focus on a single type or treat multiple types of…

基因组学 · 定量生物学 2024-10-16 Weixi Xiang , Xueting Han , Xiujuan Chai , Jing Bai

Functional-structural plant models (FSPM) replicate plants' responses to their environment and are useful for predicting behavior in a changing climate. However, they rely on detailed measurements of traits, which are difficult to collect…

Seismic geobody interpretation is crucial for structural geology studies and various engineering applications. Existing deep learning methods show promise but lack support for multi-modal inputs and struggle to generalize to different…

地球物理 · 物理学 2024-09-17 Hang Gao , Xinming Wu , Luming Liang , Hanlin Sheng , Xu Si , Gao Hui , Yaxing Li

Foundation models have garnered increasing attention for representation learning in remote sensing. Many such foundation models adopt approaches that have demonstrated success in computer vision with minimal domain-specific modification.…

计算机视觉与模式识别 · 计算机科学 2026-01-28 Kevin Lane , Morteza Karimzadeh

Growing anthropogenic pressures have increased the need for robust predictive models. Meeting this demand requires approaches that can handle bigger data to yield forecasts that capture the variability and underlying uncertainty of…

定量方法 · 定量生物学 2024-08-06 EM Wolkovich , T Jonathan Davies , William D Pearse , Michael Betancourt

Foundational models are trained on extensive datasets to capture the general trends of a domain. However, in medical imaging, the scarcity of data makes pre-training for every domain, modality, or task challenging. Instead of building…

计算机视觉与模式识别 · 计算机科学 2025-11-17 Mohammad Areeb Qazi , Munachiso S Nwadike , Ibrahim Almakky , Mohammad Yaqub , Numan Saeed

Comprehensive evaluation of geospatial foundation models (Geo-FMs) requires benchmarking across diverse tasks, sensors, and geographic regions. However, most existing benchmark datasets are limited to segmentation or classification tasks,…

计算机视觉与模式识别 · 计算机科学 2025-06-16 Aaron Banze , Timothée Stassin , Nassim Ait Ali Braham , Rıdvan Salih Kuzu , Simon Besnard , Michael Schmitt

Pretraining on large-scale, in-domain datasets grants histopathology foundation models (FM) the ability to learn task-agnostic data representations, enhancing transfer learning on downstream tasks. In computational pathology, automated…

计算机视觉与模式识别 · 计算机科学 2025-07-22 Pablo Meseguer , Rocío del Amor , Valery Naranjo