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Microtubule networks (MTs) are a component of a cell that may indicate the presence of various chemical compounds and can be used to recognize properties such as treatment resistance. Therefore, the classification of MT images is of great…

图像与视频处理 · 电气工程与系统科学 2020-12-23 Aleksei Shpilman , Dmitry Boikiy , Marina Polyakova , Daniel Kudenko , Anton Burakov , Elena Nadezhdina

Cancer immunotherapy provides durable clinical benefit in only a small fraction of patients, particularly due to a lack of reliable biomarkers for accurate prediction of treatment outcomes and evaluation of response. Here, we demonstrate…

Cell line authentication plays a crucial role in the biomedical field, ensuring researchers work with accurately identified cells. Supervised deep learning has made remarkable strides in cell line identification by studying cell…

计算机视觉与模式识别 · 计算机科学 2023-06-30 Lei Tong , Adam Corrigan , Navin Rathna Kumar , Kerry Hallbrook , Jonathan Orme , Yinhai Wang , Huiyu Zhou

In recent years, deep neural network is widely used in machine learning. The multi-class classification problem is a class of important problem in machine learning. However, in order to solve those types of multi-class classification…

机器学习 · 计算机科学 2018-06-08 Qizhi Zhang , Kuang-Chih Lee , Hongying Bao , Yuan You , Wenjie Li , Dongbai Guo

Automated in-vitro cell detection and counting have been a key theme for artificial and intelligent biological analysis such as biopsy, drug analysis and decease diagnosis. Along with the rapid development of microfluidics and lab-on-chip…

计算机视觉与模式识别 · 计算机科学 2020-01-08 Tiancheng Xia , Richard Jiang , YongQing Fu , Nanlin Jin

We present a rapid, large-field bimodal imaging platform that integrates conventional brightfield microscopy with a lensless IR imaging scanner, enabling whole-slide IR image stack acquisition in minutes. Using a dedicated deep learning…

Machine learning (ML) and deep learning (DL) models have been employed to significantly improve analyses of medical imagery, with these approaches used to enhance the accuracy of prediction and classification. Model predictions and…

图像与视频处理 · 电气工程与系统科学 2023-08-22 Rabia Asghar , Sanjay Kumar , Paul Hynds , Arslan Shaukat

Automated and semi-automated techniques in biomedical electron microscopy (EM) enable the acquisition of large datasets at a high rate. Segmentation methods are therefore essential to analyze and interpret these large volumes of data, which…

计算机视觉与模式识别 · 计算机科学 2023-08-08 Anusha Aswath , Ahmad Alsahaf , Ben N. G. Giepmans , George Azzopardi

The collection and curation of large-scale medical datasets from multiple institutions is essential for training accurate deep learning models, but privacy concerns often hinder data sharing. Federated learning (FL) is a promising solution…

计算机视觉与模式识别 · 计算机科学 2023-01-12 Rui Yan , Liangqiong Qu , Qingyue Wei , Shih-Cheng Huang , Liyue Shen , Daniel Rubin , Lei Xing , Yuyin Zhou

Histological analysis of tissue samples is one of the most widely used methods for disease diagnosis. After taking a sample from a patient, it goes through a lengthy and laborious preparation, which stains the tissue to visualize different…

计算机视觉与模式识别 · 计算机科学 2019-03-05 Yair Rivenson , Hongda Wang , Zhensong Wei , Yibo Zhang , Harun Gunaydin , Aydogan Ozcan

Accurate training labels are a key component for multi-class medical image segmentation. Their annotation is costly and time-consuming because it requires domain expertise. This work aims to develop a dual-branch network and automatically…

计算机视觉与模式识别 · 计算机科学 2024-03-07 Jianfei Liu , Christopher Parnell , Ronald M. Summers

We propose WS-DINO as a novel framework to use weak label information in learning phenotypic representations from high-content fluorescent images of cells. Our model is based on a knowledge distillation approach with a vision transformer…

计算机视觉与模式识别 · 计算机科学 2022-11-18 Jan Oscar Cross-Zamirski , Guy Williams , Elizabeth Mouchet , Carola-Bibiane Schönlieb , Riku Turkki , Yinhai Wang

Multi-label (ML) classification is an actively researched topic currently, which deals with convoluted and overlapping boundaries that arise due to several labels being active for a particular data instance. We propose a classifier capable…

机器学习 · 计算机科学 2021-07-22 Anwesha Law , Ashish Ghosh

The advancement of the neuroscientific imaging techniques has produced an unprecedented size of neural cell imaging data, which calls for automated processing. In particular, identification of cells from two photon images demands…

图像与视频处理 · 电气工程与系统科学 2019-09-26 Si-Baek Seong , Hae-Jeong Park

While deep learning, including Convolutional Neural Networks (CNNs) and Vision Transformers (ViTs), has significantly advanced classification performance, its typical reliance on extensive annotated datasets presents a major obstacle in…

计算机视觉与模式识别 · 计算机科学 2025-09-24 Matheus Vinícius Todescato , Joel Luís Carbonera

Class imbalance is a pervasive issue in the field of disease classification from medical images. It is necessary to balance out the class distribution while training a model for decent results. However, in the case of rare medical diseases,…

图像与视频处理 · 电气工程与系统科学 2024-02-21 Aminul Huq , Md Tanzim Reza , Shahriar Hossain , Shakib Mahmud Dipto

Distributed training can facilitate the processing of large medical image datasets, and improve the accuracy and efficiency of disease diagnosis while protecting patient privacy, which is crucial for achieving efficient medical image…

图像与视频处理 · 电气工程与系统科学 2024-04-17 Lisang Zhou , Meng Wang , Ning Zhou

In microscopy image cell segmentation, it is common to train a deep neural network on source data, containing different types of microscopy images, and then fine-tune it using a support set comprising a few randomly selected and annotated…

计算机视觉与模式识别 · 计算机科学 2022-11-21 Youssef Dawoud , Arij Bouazizi , Katharina Ernst , Gustavo Carneiro , Vasileios Belagiannis

Single-cell datasets often lack individual cell labels, making it challenging to identify cells associated with disease. To address this, we introduce Mixture Modeling for Multiple Instance Learning (MMIL), an expectation maximization…

Data generated by edge devices has the potential to train intelligent autonomous systems across various domains. Despite the emergence of diverse machine learning approaches addressing privacy concerns and utilizing distributed data,…

机器学习 · 计算机科学 2024-03-12 Adarsh N L , Arun P , Alok Porwal , Malcolm Aranha