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Out of equilibrium, the lack of reciprocity is the rule rather than the exception. Non-reciprocal interactions occur, for instance, in networks of neurons, directional growth of interfaces, and synthetic active materials. While wave…

软凝聚态物质 · 物理学 2021-04-20 Michel Fruchart , Ryo Hanai , Peter B. Littlewood , Vincenzo Vitelli

Experimental evidence shows that there is a feedback between cell shape and cell motion. How this feedback impacts the collective behavior of dense cell monolayers remains an open question. We investigate the effect of a feedback that tends…

Living cells respond to mechanical changes in the matrix surrounding them by applying contractile forces that are in turn transmitted to distant cells. We calculate the mechanical work that each cell performs in order to deform the matrix,…

软凝聚态物质 · 物理学 2021-08-17 Chaviva Sirote , Yair Shokef

The organization of live cells to tissues is associated with the mechanical interaction between cells, which is mediated through their elastic environment. We model cells as spherical active force dipoles surrounded by an infinite elastic…

生物物理 · 物理学 2017-06-08 Roman Golkov , Yair Shokef

We introduce a mathematical model of symbiosis between different species by taking into account the influence of each species on the carrying capacities of the others. The modeled entities can pertain to biological and ecological societies…

生物物理 · 物理学 2012-06-06 V. I. Yukalov , E. P. Yukalova , D. Sornette

A hallmark of living systems is the ability to employ a common set of versatile building blocks that can self-organize into a multitude of different structures, in a way that can be controlled with minimal cost. This capability can only be…

统计力学 · 物理学 2022-01-26 Saeed Osat , Ramin Golestanian

Nonreciprocal active matter systems typically feature an asymmetric role among interacting agents, such as a pursuer-evader relationship. We propose a multi-species nonreciprocal active matter model that is invariant under permutations of…

统计力学 · 物理学 2025-12-23 Chul-Ung Woo , Heiko Rieger , Jae Dong Noh

Biological cells are able to generate intricate structures and respond to external stimuli, sculpting their membrane from within. Simplified biomimetic systems can aid in understanding the principles which govern these shape changes and…

Bacteria possess diverse mechanisms to regulate their motility in response to environmental and physiological signals, enabling them to navigate complex habitats and adapt their behavior. Among these mechanisms, interspecies recognition…

种群与进化 · 定量生物学 2025-12-01 Mattia Mattei , David Soriano Paños , Mahantesh Halappanavar , Alex Arenas

Non-reciprocal interactions, where the influence of agent $i$ on $j$ differs from that of $j$ on $i$, are fundamental in active and living matter. Yet, most models implement such asymmetry phenomenologically. Here we show that…

适应与自组织系统 · 物理学 2025-12-23 Jyotiranjan Beuria , Venkatesh H. Chembrolu

Cellular uptake of nanoplastics is instrumental in their environmental accumulation and transfer to humans through the food chain. Despite extensive studies using spherical plastic nanoparticles, the influence of the morphological…

软凝聚态物质 · 物理学 2023-08-29 Xin Yong , Ke Du

Advances in synthetic biology allow us to engineer bacterial collectives with pre-specified characteristics. However, the behavior of these collectives is difficult to understand, as cellular growth and division as well as extra-cellular…

细胞行为 · 定量生物学 2017-09-13 James J. Winkle , Oleg Igoshin , Matthew R. Bennett , Krešimir Josić , William Ott

Biomembranes wrapping cells and organelles are not only the partitions that separate the insides but also dynamic fields for biological functions accompanied by membrane shape changes. In this review, we discuss the spatiotemporal patterns…

软凝聚态物质 · 物理学 2025-01-22 Hiroshi Noguchi

To model the morphogenesis of rod-shaped bacterial micro-colony, several individual-based models have been proposed in the biophysical literature. When studying the shape of micro-colonies, most models present interaction forces such as…

细胞行为 · 定量生物学 2020-08-12 Marie Doumic , Sophie Hecht , Diane Peurichard

Cell-cell adhesion is one the most fundamental mechanisms regulating collective cell migration during tissue development, homeostasis and repair, allowing cell populations to self-organize and eventually form and maintain complex tissue…

细胞行为 · 定量生物学 2022-11-16 Carles Falcó , Ruth E. Baker , José A. Carrillo

The organization of live cells into tissues and their subsequent biological function involves inter-cell mechanical interactions, which are mediated by their elastic environment. To model this interaction, we consider cells as spherical…

软凝聚态物质 · 物理学 2024-02-20 Roman Golkov , Yair Shokef

Modeling membrane interactions with arbitrarily shaped colloidal particles, such as environmental micro- and nanoplastics, at the cell scale remains particularly challenging, owing to the complexity of particle geometries and the need to…

软凝聚态物质 · 物理学 2025-09-15 Didarul Ahasan Redwan , Justin Reicher , Xin Yong

Cellular membranes exhibit a large variety of shapes, strongly coupled to their function. Many biological processes involve dynamic reshaping of membranes, usually mediated by proteins. This interaction works both ways: while proteins…

软凝聚态物质 · 物理学 2018-06-12 Afshin Vahid , Anđela Šarić , Timon Idema

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

种群与进化 · 定量生物学 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

We study a process of pattern formation for a generic model of species anchored to the nodes of a network where local reactions take place, and that experience non-reciprocal long-range interactions, encoded by the network directed links.…

斑图形成与孤子 · 物理学 2025-10-22 Timoteo Carletti , Riccardo Muolo
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