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A Deep Autoencoder based content retrieval algorithm is proposed for prediction and differentiation of cancer types based on the presence of epigenetic patterns of DNA methylation identified in genetic regions known as CpG islands. The…

定量方法 · 定量生物学 2018-10-08 Mohammed Khwaja , Melpomeni Kalofonou , Chris Toumazou

Precise prognostic stratification of colorectal cancer (CRC) remains a major clinical challenge due to its high heterogeneity. The conventional TNM staging system is inadequate for personalized medicine. We aimed to develop and validate a…

机器学习 · 计算机科学 2025-11-20 Zisong Wang , Xuanyu Wang , Hang Chen , Haizhou Wang , Yuxin Chen , Yihang Xu , Yunhe Yuan , Lihuan Luo , Xitong Ling , Xiaoping Liu

Solving complex classification tasks using deep neural networks typically requires large amounts of annotated data. However, corresponding class labels are noisy when provided by error-prone annotators, e.g., crowdworkers. Training standard…

机器学习 · 计算机科学 2023-10-25 Marek Herde , Denis Huseljic , Bernhard Sick

Accurate diagnosis of breast cancer in histopathology images is challenging due to the heterogeneity of cancer cell growth as well as of a variety of benign breast tissue proliferative lesions. In this paper, we propose a practical and…

计算机视觉与模式识别 · 计算机科学 2020-05-06 Xingyu Li , Marko Radulovic , Ksenija Kanjer , Konstantinos N. Plataniotis

While deep learning methods are increasingly being applied to tasks such as computer-aided diagnosis, these models are difficult to interpret, do not incorporate prior domain knowledge, and are often considered as a "black-box." The lack of…

计算机视觉与模式识别 · 计算机科学 2018-06-05 Shiwen Shen , Simon X. Han , Denise R. Aberle , Alex A. T. Bui , Willliam Hsu

Breast cancer is a heterogeneous disease with different molecular subtypes, clinical behavior, treatment responses as well as survival outcomes. The development of a reliable, accurate, available and inexpensive method to predict the…

计算机视觉与模式识别 · 计算机科学 2024-12-20 Mohaddeseh Chegini , Ali Mahloojifar

This is the submission for mitosis detection in the context of the MIDOG 2021 challenge. It is based on the two-stage objection model Faster RCNN as well as DenseNet as a backbone for the neural network architecture. It achieves a F1-score…

计算机视觉与模式识别 · 计算机科学 2021-09-03 Michel Halmes , Hippolyte Heuberger , Sylvain Berlemont

This paper proposes an efficient system for classifying cervical cancer cells using pre-trained convolutional neural networks (CNNs). We first fine-tune five pre-trained CNNs and minimize the overall cost of misclassification by…

计算机视觉与模式识别 · 计算机科学 2024-02-27 Ashfiqun Mustari , Rushmia Ahmed , Afsara Tasnim , Jakia Sultana Juthi , G M Shahariar

Explainability of Deep Neural Networks (DNNs) has been garnering increasing attention in recent years. Of the various explainability approaches, concept-based techniques stand out for their ability to utilize human-meaningful concepts…

计算机视觉与模式识别 · 计算机科学 2023-10-05 Fatemeh Aghaeipoor , Dorsa Asgarian , Mohammad Sabokrou

Explainability of deep learning methods is imperative to facilitate their clinical adoption in digital pathology. However, popular deep learning methods and explainability techniques (explainers) based on pixel-wise processing disregard…

This study explores the integration of multiple Explainable AI (XAI) techniques to enhance the interpretability of deep learning models for brain tumour detection. A custom Convolutional Neural Network (CNN) was developed and trained on the…

人工智能 · 计算机科学 2026-02-06 Patrick McGonagle , William Farrelly , Kevin Curran

Deep learning models benefit from training with a large dataset (labeled or unlabeled). Following this motivation, we present an approach to learn a deep learning model for the automatic segmentation of Organs at Risk (OARs) in cervical…

图像与视频处理 · 电气工程与系统科学 2023-02-22 Monika Grewal , Dustin van Weersel , Henrike Westerveld , Peter A. N. Bosman , Tanja Alderliesten

Importance estimators are explainability methods that quantify feature importance for deep neural networks (DNN). In vision transformers (ViT), the self-attention mechanism naturally leads to attention maps, which are sometimes interpreted…

计算机视觉与模式识别 · 计算机科学 2024-10-28 Lennart Brocki , Jakub Binda , Neo Christopher Chung

Deploying a deep learning model on mobile/IoT devices is a challenging task. The difficulty lies in the trade-off between computation speed and accuracy. A complex deep learning model with high accuracy runs slowly on resource-limited…

计算机视觉与模式识别 · 计算机科学 2018-12-31 Xin Li , Shuai Zhang , Bolan Jiang , Yingyong Qi , Mooi Choo Chuah , Ning Bi

To train a robust deep learning model, one usually needs a balanced set of categories in the training data. The data acquired in a medical domain, however, frequently contains an abundance of healthy patients, versus a small variety of…

图像与视频处理 · 电气工程与系统科学 2020-03-09 Jevgenij Gamper , Brandon Chan , Yee Wah Tsang , David Snead , Nasir Rajpoot

Deep learning-based diagnostic models often suffer performance drops due to distribution shifts between training (source) and test (target) domains. Collecting and labeling sufficient target domain data for model retraining represents an…

计算机视觉与模式识别 · 计算机科学 2025-07-02 Yaofei Duan , Yuhao Huang , Xin Yang , Luyi Han , Xinyu Xie , Zhiyuan Zhu , Ping He , Ka-Hou Chan , Ligang Cui , Sio-Kei Im , Dong Ni , Tao Tan

Requirement of large annotated datasets restrict the use of deep convolutional neural networks (CNNs) for many practical applications. The problem can be mitigated by using active learning (AL) techniques which, under a given annotation…

计算机视觉与模式识别 · 计算机科学 2020-08-14 Sharat Agarwal , Himanshu Arora , Saket Anand , Chetan Arora

The application of deep learning in medical imaging has significantly advanced diagnostic capabilities, enhancing both accuracy and efficiency. Despite these benefits, the lack of transparency in these AI models, often termed "black boxes,"…

计算机视觉与模式识别 · 计算机科学 2024-09-23 Eleonora Beatrice Rossi , Eleonora Lopez , Danilo Comminiello

Deep-learning-based pipelines have shown the potential to revolutionalize microscopy image diagnostics by providing visual augmentations to a trained pathology expert. However, to match human performance, the methods rely on the…

Deep learning-based techniques have proven effective in polyp segmentation tasks when provided with sufficient pixel-wise labeled data. However, the high cost of manual annotation has created a bottleneck for model generalization. To…

计算机视觉与模式识别 · 计算机科学 2024-03-22 Duojun Huang , Xinyu Xiong , De-Jun Fan , Feng Gao , Xiao-Jian Wu , Guanbin Li