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相关论文: MolGround: A Benchmark for Molecular Grounding

200 篇论文

As quantum computing (QC) continues to evolve in hardware and software, measuring progress in this complex and diverse field remains a challenge. To track progress, uncover bottlenecks, and evaluate community efforts, benchmarks play a…

Recent advancements in AI agents have demonstrated their growing potential to drive and support scientific discovery. In this work, we introduce MLR-Bench, a comprehensive benchmark for evaluating AI agents on open-ended machine learning…

机器学习 · 计算机科学 2025-10-23 Hui Chen , Miao Xiong , Yujie Lu , Wei Han , Ailin Deng , Yufei He , Jiaying Wu , Yibo Li , Yue Liu , Bryan Hooi

In the past two decades, machine learning potentials (MLP) have reached a level of maturity that now enables applications to large-scale atomistic simulations of a wide range of systems in chemistry, physics and materials science. Different…

化学物理 · 物理学 2021-07-09 Emir Kocer , Tsz Wai Ko , Jörg Behler

Coarse-grained (CG) modeling simplifies molecular systems by mapping groups of atoms into representative units. However, traditional CG approaches rely on fixed mapping rules, which limit their ability to handle diverse chemical systems and…

计算物理 · 物理学 2025-09-26 Zhixuan Zhong , Linbo Ma , Jian Jiang

Multi-modal large language models have demonstrated impressive performance across various tasks in different modalities. However, existing multi-modal models primarily emphasize capturing global information within each modality while…

计算机视觉与模式识别 · 计算机科学 2024-03-06 Zhaowei Li , Qi Xu , Dong Zhang , Hang Song , Yiqing Cai , Qi Qi , Ran Zhou , Junting Pan , Zefeng Li , Van Tu Vu , Zhida Huang , Tao Wang

Scientific machine learning research spans diverse domains and data modalities, yet existing benchmark efforts remain siloed and lack standardization. This makes novel and transformative applications of machine learning to critical…

Designing compounds with desired properties is a key element of the drug discovery process. However, measuring progress in the field has been challenging due to the lack of realistic retrospective benchmarks, and the large cost of…

生物大分子 · 定量生物学 2023-06-16 Tobiasz Cieplinski , Tomasz Danel , Sabina Podlewska , Stanislaw Jastrzebski

Geometric deep learning (GDL) has demonstrated huge power and enormous potential in molecular data analysis. However, a great challenge still remains for highly efficient molecular representations. Currently, covalent-bond-based molecular…

计算物理 · 物理学 2023-06-28 Cong Shen , Jiawei Luo , Kelin Xia

Multi-Hop Question Answering (MHQA) tasks present a significant challenge for large language models (LLMs) due to the intensive knowledge required. Current solutions, like Retrieval-Augmented Generation, typically retrieve potential…

计算与语言 · 计算机科学 2024-09-17 Zhengliang Shi , Weiwei Sun , Shen Gao , Pengjie Ren , Zhumin Chen , Zhaochun Ren

Scaling deep learning models has been at the heart of recent revolutions in language modelling and image generation. Practitioners have observed a strong relationship between model size, dataset size, and performance. However,…

A key frontier for Multimodal Large Language Models (MLLMs) is the ability to perform deep mathematical and spatial reasoning directly from images, moving beyond their established success in semantic description. Mathematical surface plots…

人工智能 · 计算机科学 2025-09-10 Nilay Pande , Sahiti Yerramilli , Jayant Sravan Tamarapalli , Rynaa Grover

The deployment of large language models (LLMs) in production environments has created an urgent need for observability systems that span the full stack -- from model internals to GPU kernels. Yet existing monitoring approaches address…

软件工程 · 计算机科学 2026-04-30 Twinkll Sisodia

Large Language Models (LLMs) have shown impressive performance across various domains, but their ability to perform molecular reasoning remains underexplored. Existing methods mostly rely on general-purpose prompting, which lacks…

Foundation models, first introduced in 2021, refer to large-scale pretrained models (e.g., large language models (LLMs) and vision-language models (VLMs)) that learn from extensive unlabeled datasets through unsupervised methods, enabling…

Recently, large language models (LLMs) have achieved remarkable breakthroughs in general domains such as programming and writing, and have demonstrated strong potential in various scientific research scenarios. However, the capabilities of…

机器学习 · 计算机科学 2025-09-16 Yonghao Weng , Liqiang Gao , Linwu Zhu , Jian Huang

Robots collaborating with humans must convert natural language goals into actionable, physically grounded decisions. For example, executing a command such as "go two meters to the right of the fridge" requires grounding semantic references,…

机器人学 · 计算机科学 2026-03-20 Swagat Padhan , Lakshya Jain , Bhavya Minesh Shah , Omkar Patil , Thao Nguyen , Nakul Gopalan

We present a novel machine learning approach to understanding conformation dynamics of biomolecules. The approach combines kernel-based techniques that are popular in the machine learning community with transfer operator theory for…

计算物理 · 物理学 2019-01-24 Stefan Klus , Andreas Bittracher , Ingmar Schuster , Christof Schütte

Large-scale Language Models (LLMs) have revolutionized human-AI interaction and achieved significant success in the generation of novel ideas. However, current assessments of idea generation overlook crucial factors such as knowledge…

人工智能 · 计算机科学 2025-05-27 Yansheng Qiu , Haoquan Zhang , Zhaopan Xu , Ming Li , Diping Song , Zheng Wang , Kaipeng Zhang

Advancements in Large Language Models (LLMs) drive interest in scientific applications, necessitating specialized benchmarks such as Earth science. Existing benchmarks either present a general science focus devoid of Earth science…

计算与语言 · 计算机科学 2025-06-02 Wanghan Xu , Xiangyu Zhao , Yuhao Zhou , Xiaoyu Yue , Ben Fei , Fenghua Ling , Wenlong Zhang , Lei Bai

With the recent advances in machine learning for quantum chemistry, it is now possible to predict the chemical properties of compounds and to generate novel molecules. Existing generative models mostly use a string- or graph-based…

生物大分子 · 定量生物学 2020-10-14 Vitali Nesterov , Mario Wieser , Volker Roth