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Communication and coordination play a major role in the ability of bacterial cells to adapt to ever changing environments and conditions. Recent work has shown that such coordination underlies several aspects of bacterial responses…

Predictions of biodiversity trajectories under climate change are crucial in order to act effectively in maintaining the diversity of species. In many ecological applications, future predictions are made under various global warming…

In natural foraging, many organisms seem to perform two different types of motile search: directed search (taxis) and random search. The former is observed when the environment provides cues to guide motion towards a target. The latter…

统计力学 · 物理学 2017-12-27 Łukasz Kuśmierz , Taro Toyoizumi

In real-world systems, phase transitions often materialize abruptly, making it difficult to design appropriate controls that help uncover underlying processes. Some agent-based computational models display transformations similar to phase…

物理与社会 · 物理学 2018-10-10 S. S. Chanda , B. McKelvey

During their lifetimes, individuals in populations pass through different states, and the notion of an occupancy time describes the amount of time an individual spends in a given set of states. Questions related to this idea were studied in…

概率论 · 数学 2020-12-02 George Chappelle , Alan Hastings , Martin Rasmussen

Active search, in applications like environment monitoring or disaster response missions, involves autonomous agents detecting targets in a search space using decision making algorithms that adapt to the history of their observations.…

机器人学 · 计算机科学 2023-05-23 Arundhati Banerjee , Ramina Ghods , Jeff Schneider

Rate variation among the sites of a molecular sequence is commonly found in applications of phylogenetic inference. Several approaches exist to account for this feature but they do not usually enable the investigator to pinpoint the sites…

定量方法 · 定量生物学 2013-05-23 Elisa Loza-Reyes , Merrilee Hurn , Tony Robinson

Cooperative interactions pervade in a broad range of many-body populations, such as ecological communities, social organizations, and economic webs. We investigate the dynamics of a population of two equivalent species A and B that are…

种群与进化 · 定量生物学 2025-01-14 Jordi Piñero , S. Redner , Ricard Solé

A model of an Ant System where ants are controlled by a spiking neural circuit and a second order pheromone mechanism in a foraging task is presented. A neural circuit is trained for individual ants and subsequently the ants are exposed to…

神经与进化计算 · 计算机科学 2015-09-21 Cristian Jimenez-Romero , David Sousa-Rodrigues , Jeffrey H. Johnson , Vitorino Ramos

Predator-prey coevolution is commonly thought to result in reciprocal arms races that produce increasingly extreme and complex traits. However, such directional change is not inevitable. Here, we provide evidence for a previously…

种群与进化 · 定量生物学 2014-02-18 Aaron P Wagner , Luis Zaman , Ian Dworkin , Charles Ofria

Flocks of birds and schools of fish are familiar examples of spatial patterns formed by living organisms. In contrast to the patterns on the skins of, say, zebra and giraffe, the patterns of our interest are {\it transient} although…

种群与进化 · 定量生物学 2007-05-23 Debashish Chowdhury , Katsuhiro Nishinari , Andreas Schadschneider

In biology and ecology, individuals or communities of individuals living in unpredictable environments often alternate between different evolutionary strategies to spread and reduce risks. Such behavior is commonly referred to as…

种群与进化 · 定量生物学 2015-03-11 Jorge Hidalgo , Simone Pigolotti , Miguel A. Munoz

The colonization of unoccupied territory by invading species, known as range expansion, is a spatially heterogeneous non-equilibrium growth process. We introduce a two-species Eden growth model to analyze the interplay between…

统计力学 · 物理学 2011-11-15 Jan-Timm Kuhr , Madeleine Leisner , Erwin Frey

In species reproducing both sexually and asexually clones are often more common in recently established populations. Earlier studies have suggested that this pattern arises from natural selection favouring asexual recruitment in young…

Patch foraging involves the deliberate and planned process of determining the optimal time to depart from a resource-rich region and investigate potentially more beneficial alternatives. The Marginal Value Theorem (MVT) is frequently used…

人工智能 · 计算机科学 2025-12-30 Yesid Fonseca , Manuel S. Ríos , Nicanor Quijano , Luis F. Giraldo

We introduce an evolutionary metacommunity of multitrophic food webs on several habitats coupled by migration. In contrast to previous studies that focus either on evolutionary or on spatial aspects, we include both and investigate the…

种群与进化 · 定量生物学 2018-04-20 Korinna T. Allhoff , Eva Marie Weiel , Tobias Rogge , Barbara Drossel

We propose a class of evolutionary models that involves an arbitrary exchangeable process as the breeding process and different selection schemes. In those models, a new genome is born according to the breeding process, and then a genome is…

神经与进化计算 · 计算机科学 2020-08-25 Jüri Lember , Chris Watkins

Reaction-diffusion systems may lead to the formation of steady state heterogeneous spatial patterns, known as Turing patterns. Their mathematical formulation is important for the study of pattern formation in general and play central roles…

斑图形成与孤子 · 物理学 2015-06-05 Lucas D. Fernandes , Marcus A. M. Aguiar

Different evolutionary models are known to make disparate predictions for the success of an invading mutant in some situations. For example, some evolutionary mechanics lead to amplification of selection in structured populations, while…

种群与进化 · 定量生物学 2020-07-01 Francisco Herrerías-Azcué , Vicente Pérez-Muñuzuri , Tobias Galla

Human beings are creatures of habit. In their daily life, people tend to repeatedly consume similar types of food items over several days and occasionally switch to consuming different types of items when the consumptions become overly…

信息检索 · 计算机科学 2020-10-28 Yue Liu , Helena Lee , Palakorn Achananuparp , Ee-Peng Lim , Tzu-Ling Cheng , Shou-De Lin
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