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Migratory and tissue resident cells exhibit highly branched morphologies to perform their function and to adapt to the microenvironment. Immune cells, for example, display transient branched shapes while exploring the surrounding tissues.…

生物物理 · 物理学 2024-04-02 Jiayi Liu , Javier Boix-Campos , Jonathan E. Ron , Johan M. Kux , Nir S. Gov , Pablo J. Sáez

Reactive hyperemia is a well-established technique for the non-invasive evaluation of the peripheral microcirculatory function, measured as the magnitude of limb re-perfusion after a brief period of ischemia. Despite widespread adoption by…

组织与器官 · 定量生物学 2023-02-03 Albertoo Coccarelli , Michael D. Nelson

This study utilizes mathematical modeling to offer computational insights into biological heat transfer within elastic skin tissues. This heat transfer is driven by a moving heat source that relies on various relaxation times. Time delay…

组织与器官 · 定量生物学 2024-10-14 Abdelrahman A. Abbas , Ibrahim A. Abbas , Aboelnour N. Abdalla

In this paper, we deploy a Lattice Boltzmann - Particle Dynamics (LBPD) method to dissect the transport properties within arterioles and venules. First, the numerical approach is applied to study the transport of Red Blood Cells (RBC)…

计算物理 · 物理学 2018-01-30 Giacomo Falcucci , Simone Melchionna , Paolo Decuzzi , Sauro Succi

The migratory dynamics of cells in physiological processes, ranging from wound healing to cancer metastasis, rely on contact-mediated cell-cell interactions. These interactions play a key role in shaping the stochastic trajectories of…

Wound healing assays are commonly used to study how populations of cells, initialised on a two-dimensional surface, act to close an artificial wound space. While real wounds have different shapes, standard wound healing assays often deal…

细胞行为 · 定量生物学 2018-05-18 Wang Jin , Kai-Yin Lo , Shih-En Chou , Scott W McCue , Matthew J Simpson

The response of cells during spreading and motility is dictated by several multi-physics events, which are triggered by extracellular cues and occur at different time-scales. For this sake, it is not completely appropriate to provide a cell…

软凝聚态物质 · 物理学 2020-11-26 M. Serpelloni , M. Arricca , C. Bonanno , A. Salvadori

Achieving effective synergy between radiotherapy and immunotherapy is critical for optimizing tumor control and treatment outcomes. To explore the underlying mechanisms of this synergy, we have investigated a novel treatment approach known…

定量方法 · 定量生物学 2025-04-23 Yixun Xing , Casey Moore , Debabrata Saha , Dan Nguyen , MaryLena Bleile , Xun Jia , Robert Timmerman , Hao Peng , Steve Jiang

The stochastic discrete space-time model of an immune response on tumor spreading in a two-dimensional square lattice has been developed. The immunity-tumor interactions are described at the cellular level and then transferred into the…

comp-gas · 物理学 2007-05-23 Margarita Voitikova

With the advance of imaging technology, digital pathology imaging of tumor tissue slides is becoming a routine clinical procedure for cancer diagnosis. This process produces massive imaging data that capture histological details in high…

统计方法学 · 统计学 2020-12-10 Qiwei Li , Xinlei Wang , Faming Liang , Guanghua Xiao

As an effective method to deliver external materials into biological cells, microinjection has been widely applied in the biomedical field. However, the cognition of cell mechanical property is still inadequate, which greatly limits the…

机器人学 · 计算机科学 2022-11-29 Shengzheng Kang , Zhicheng Song , Xiaolong Yang , Yao Li , Hongtao Wu , Tao Li

Motivated by rolling adhesion of white blood cells in the vasculature, we study how cells move in linear shear flow above a wall to which they can adhere via specific receptor-ligand bonds. Our computer simulations are based on a Langevin…

细胞行为 · 定量生物学 2008-04-30 C. B. Korn , U. S. Schwarz

We introduce an interacting particle system that models the spread of an epidemic in terms of heterogeneous diffusive dynamics, rather than exogenous contact and transmission rates at the population level as in classical compartmental…

概率论 · 数学 2026-05-20 Eliana Fausti , Andreas Sojmark

We present a computational approach for solving reaction-diffusion equations on evolving surfaces which have been obtained from cell image data. It is based on finite element spaces defined on surface triangulations extracted from time…

An individual-based model of stochastic branching is proposed and studied, in which point particles drift in $\bar{\mathds{R}}_{+}:=[0,+\infty)$ towards the origin (edge) with unit speed, where each of them splits into two particles that…

动力系统 · 数学 2019-10-30 Yuri Kozitsky

This paper investigates cells proliferation dynamics in small tumor cell aggregates using an individual based model (IBM). The simulation model is designed to study the morphology of the cell population and of the cell lineages as well as…

Animal morphogenesis often involves significant shape changes of epithelial tissue sheets. Great progress has been made in understanding the underlying cellular driving forces and their coordination through biomechanical feedback loops.…

软凝聚态物质 · 物理学 2024-09-23 Nikolas H. Claussen , Fridtjof Brauns

Cell motility is one of the most fundamental phenomena underlying biological processes that maintain living organisms alive. Here we introduce a simple model to describe the motility of cells which include not only time-correlated internal…

生物物理 · 物理学 2022-07-13 T. N. Azevedo , L. G. Rizzi

The phenomenological model for cell shape deformation and cell migration (Chen et.al. 2018; Vermolen and Gefen 2012) is extended with the incorporation of cell traction forces and the evolution of cell equilibrium shapes as a result of cell…

细胞行为 · 定量生物学 2021-04-27 Qiyao Peng , Fred Vermolen , Daphne Weihs

In this work, we present a novel approach to process the DIC measurements of multiple biaxial stretching protocols. In particular, we develop a optimization-based approach, which calculates the smoothed nodal displacements using a moving…

图像与视频处理 · 电气工程与系统科学 2025-05-27 Jihong Wang , Chung-Hao Lee , William Richardson , Yue Yu