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Local Interpretable Model-Agnostic Explanations (LIME) is a popular technique used to increase the interpretability and explainability of black box Machine Learning (ML) algorithms. LIME typically generates an explanation for a single…

机器学习 · 计算机科学 2019-06-26 Muhammad Rehman Zafar , Naimul Mefraz Khan

We present Propulate, an evolutionary optimization algorithm and software package for global optimization and in particular hyperparameter search. For efficient use of HPC resources, Propulate omits the synchronization after each generation…

神经与进化计算 · 计算机科学 2024-10-25 Oskar Taubert , Marie Weiel , Daniel Coquelin , Anis Farshian , Charlotte Debus , Alexander Schug , Achim Streit , Markus Götz

Background and Objective: Biomedical Named Entity Recognition (BioNER) is a foundational task in medical informatics, crucial for downstream applications like drug discovery and clinical trial matching. However, adapting general-domain…

计算与语言 · 计算机科学 2025-12-30 Jian Chen , Leilei Su , Cong Sun

Machine learning models offer powerful predictive capabilities but often lack transparency. Local Interpretable Model-agnostic Explanations (LIME) addresses this by perturbing features and measuring their impact on a model's output. In…

机器学习 · 计算机科学 2024-12-24 Nelson Colón Vargas

Food authenticity studies are concerned with determining if food samples have been correctly labeled or not. Discriminant analysis methods are an integral part of the methodology for food authentication. Motivated by food authenticity…

统计方法学 · 统计学 2010-10-08 Thomas Brendan Murphy , Nema Dean , Adrian E. Raftery

High-dimensional dense embeddings have become central to modern Information Retrieval, but many dimensions are noisy or redundant. Recently proposed DIME (Dimension IMportance Estimation), provides query-dependent scores to identify…

We extend the standard rough set-based approach to deal with huge amounts of numeric attributes versus small amount of available objects. Here, a novel approach of clustering along with dimensionality reduction; Hybrid Fuzzy C Means-Quick…

计算工程、金融与科学 · 计算机科学 2013-06-11 E. N. Sathishkumar , K. Thangavel , T. Chandrasekhar

Glioma, the prevalent primary brain tumor, exhibits diverse aggressiveness levels and prognoses. Precise classification of glioma is paramount for treatment planning and predicting prognosis. This study aims to develop an algorithm to fuse…

图像与视频处理 · 电气工程与系统科学 2026-03-10 Kiranmayee Janardhan , Christy Bobby Thomas

Wolumes is a fast and stand-alone computer program written in standard C that allows the measure of atom volumes in proteins. Its algorithm is a simple discretization of the space by means of a grid of points at 0.75 Angstroms from each…

生物大分子 · 定量生物学 2014-06-13 Oliviero Carugo

Accurate screening of cancer types is crucial for effective cancer detection and precise treatment selection. However, the association between gene expression profiles and tumors is often limited to a small number of biomarker genes. While…

神经与进化计算 · 计算机科学 2024-04-09 Xubin Wang , Yunhe Wang , Zhiqing Ma , Ka-Chun Wong , Xiangtao Li

The problem of model selection with a limited number of experimental trials has received considerable attention in cognitive science, where the role of experiments is to discriminate between theories expressed as computational models.…

Although much progress has been made in classification with high-dimensional features \citep{Fan_Fan:2008, JGuo:2010, CaiSun:2014, PRXu:2014}, classification with ultrahigh-dimensional features, wherein the features much outnumber the…

机器学习 · 统计学 2016-11-14 Yanming Li , Hyokyoung Hong , Jian Kang , Kevin He , Ji Zhu , Yi Li

Explainability algorithms such as LIME have enabled machine learning systems to adopt transparency and fairness, which are important qualities in commercial use cases. However, recent work has shown that LIME's naive sampling strategy can…

机器学习 · 计算机科学 2021-03-23 Sean Saito , Eugene Chua , Nicholas Capel , Rocco Hu

Since the seminal paper by Breiman in 2001, who pointed out a potential harm of prediction multiplicities from the view of explainable AI, global analysis of a collection of all good models, also known as a `Rashomon set,' has been…

机器学习 · 计算机科学 2022-04-26 Kota Mata , Kentaro Kanamori , Hiroki Arimura

Large-scale datasets have been pivotal to the advancements of deep learning models in recent years, but training on such large datasets invariably incurs substantial storage and computational overhead. Meanwhile, real-world datasets often…

计算机视觉与模式识别 · 计算机科学 2025-06-23 Suorong Yang , Peng Ye , Wanli Ouyang , Dongzhan Zhou , Furao Shen

Machine learning (ML) approaches have been used to develop highly accurate and efficient applications in many fields including bio-medical science. However, even with advanced ML techniques, cancer classification using gene expression data…

基因组学 · 定量生物学 2023-05-10 Mahmood Khalsan , Mu Mu , Eman Salih Al-Shamery , Lee Machado , Suraj Ajit , Michael Opoku Agyeman

Feature selection techniques are essential for high-dimensional data analysis. In the last two decades, their popularity has been fuelled by the increasing availability of high-throughput biomolecular data where high-dimensionality is a…

定量方法 · 定量生物学 2024-01-18 Pengyi Yang , Hao Huang , Chunlei Liu

In many global Optimization Problems, it is required to evaluate a global point (min or max) in large space that calculation effort is very high. In this paper is presented new approach for optimization problem with subdivision labeling…

神经与进化计算 · 计算机科学 2013-07-23 Masoumeh Vali

We present a new optimization method for the group selection problem in linear regression. In this problem, predictors are assumed to have a natural group structure and the goal is to select a small set of groups that best fits the…

统计方法学 · 统计学 2024-04-23 Anant Mathur , Sarat Moka , Benoit Liquet , Zdravko Botev

With this paper, we contribute to the growing research area of feature-based analysis of bio-inspired computing. In this research area, problem instances are classified according to different features of the underlying problem in terms of…

神经与进化计算 · 计算机科学 2016-02-10 Shayan Poursoltan , Frank Neumann
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