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Escherichia coli and other bacteria use rotating helical filaments to swim. Each cell typically has about four filaments, which bundle or disperse depending on the sense of motor rotation. To study the bundling process, we built a…

软凝聚态物质 · 物理学 2009-11-10 MunJu Kim , James C. Bird , Annemarie J. Van Parys , Kenneth S. Breuer , Thomas R. Powers

To study the compressional forces exerted by a bundle of living stiff filaments pressing on a surface, akin to the case of an actin bundle in filopodia structures, we have performed particulate Molecular Dynamics simulations of a grafted…

软凝聚态物质 · 物理学 2015-06-17 Sanoop Ramachandran , Jean-Paul Ryckaert

Helical ribbons arise in many biological and engineered systems, often driven by anisotropic surface stress, residual strain, and geometric or elastic mismatch between layers of a laminated composite. A full mathematical analysis is…

数学物理 · 物理学 2012-09-18 Zi Chen , Carmel Majidi , David J. Srolovitz , Mikko Haataja

We present a braided circuit topology framework for investigating topology and structural phase transitions in aggregates of semiflexible polymers. In the conventional approach to circuit topology, which specifically applies to single…

软凝聚态物质 · 物理学 2024-02-27 Jonas Berx , Alireza Mashaghi

The shape assumed by a slender elastic structure is a function both of the geometry of the space in which it exists and the forces it experiences. We explore by experiments and theoretical analysis, the morphological phase-space of a…

软凝聚态物质 · 物理学 2023-12-11 S Ganga Prasath , Joel Marthelot , Rama Govindarajan , Narayanan Menon

Networks of flexible filaments often involve regions of tight contact. Predictively understanding the equilibrium configurations of these systems is challenging due to intricate couplings between topology, geometry, large nonlinear…

We investigate a simplified continuum model of a twisted homotrilayer TMD with negligible next-nearest layer couplings. We systematically analyze band structure and topology of various stacking configurations in a twist angle range from…

介观与纳米尺度物理 · 物理学 2023-10-10 Hassan AlBuhairan , Michael Vogl

Using dynamic simulations and analytic methods, we study the elastic response of a helical filament subject to uniaxial tension over a wide range of bend and twist persistence length. A low-pitch helix at low temperatures exhibits a…

软凝聚态物质 · 物理学 2008-03-31 Hirofumi Wada , Roland R. Netz

Bacterial mobility is powered by rotation of helical flagellar filaments driven by rotary motors. Flagellin isolated from {\it Salmonella Typhimurium} SJW1660 strain, which differs by a point mutation from the wild-type strain, assembles…

生物大分子 · 定量生物学 2017-06-28 D. Louzon , A. Ginsburg , W. Schwenger , T. Dvir , Z. Dogic , U. Raviv

The dynamic behavior of bundles of actin filaments growing against a loaded obstacle is investigated through a generalized version of the standard multi filaments Brownian Ratchet model in which the (de)polymerizing filaments are treated…

生物物理 · 物理学 2019-05-22 Alessia Perilli , Carlo Pierleoni , Jean-Paul Ryckaert

We investigate the finite bending and the associated bending instability of an incompressible dielectric slab subject to a combination of applied voltage and axial compression, using nonlinear electro-elasticity theory and its incremental…

软凝聚态物质 · 物理学 2018-10-04 Yipin Su , Bin Wu , Weiqiu Chen , Michel Destrade

The conformations and dynamics of semiflexible filaments subject to a homogeneous external (gravitational) field, e.g., in a centrifuge, are studied numerically and analytically. The competition between hydrodynamic drag and bending…

生物物理 · 物理学 2016-08-23 G. Saggiorato , J. Elgeti , R. G. Winkler , G. Gompper

Any macroscopic deformation of a filamentous bundle is necessarily accompanied by local sliding and/or stretching of the constituent filaments. Yet the nature of the sliding friction between two aligned filaments interacting through…

We study how the three-dimensional shape of rigid filaments determines the microscopic dynamics and macroscopic rheology of entangled semi-dilute Brownian suspensions. To control the filament shape we use bacterial flagella, which are…

A controlled surface wrinkling pattern has been widely used in diverse applications, such as stretchable electronics, smart windows, and haptics. Here, we focus on hexagonal wrinkling patterns because of their great potentials in realizing…

软凝聚态物质 · 物理学 2021-02-24 Teng Zhang

We study the buckling of an idealized, semiflexible filament along whose contour magnetic moments are placed. {We give analytic expressions for the critical stiffness of the filament below which it buckles due to the magnetic compression.…

软凝聚态物质 · 物理学 2017-10-10 Horst-Holger Boltz , Stefan Klumpp

We investigate the transport of elastic active filaments in two-dimensional turbulence, focusing on how propulsion geometry and elasticity determine vortex trapping and transport. Using a bead-spring model with activity applied at the…

流体动力学 · 物理学 2026-05-26 Kunal Kumar , Aliv Sahoo , Rahul Kumar Singh , Samriddhi Sankar Ray

This study is motivated by recent observations on the ubiquitous interstellar density filaments and guided by the modern theory of magnetohydrodynamic (MHD) turbulence. The interstellar turbulence shapes the observed density structure. The…

星系天体物理 · 物理学 2018-02-06 Siyao Xu , Alex Lazarian

The cytoskeleton is an important subsystem of cells that is involved for example in cell division and locomotion. It consists of filaments that are cross-linked by molecular motors that can induce relative sliding between filaments and…

统计力学 · 物理学 2007-08-08 P. K. Mohanty , K. Kruse

We study the deformations of elastic filaments confined within slowly-shrinking circular boundaries, under contact forces with friction. We perform computations with a spring-lattice model that deforms like a thin inextensible filament of…

软凝聚态物质 · 物理学 2022-02-23 Silas Alben