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Modeling the spontaneous evolution of morphology in natural systems and its preservation by proportionate growth remains a major scientific challenge. Yet, it is conceivable that if the basic mechanisms of growth and the coupled kinetic…

软凝聚态物质 · 物理学 2020-12-30 Virginia von Streng , Rami Abi-Akl , Bianca Giovanardi , Tal Cohen

Dynamic graph modeling is crucial for understanding complex structures in web graphs, spanning applications in social networks, recommender systems, and more. Most existing methods primarily emphasize structural dependencies and their…

社会与信息网络 · 计算机科学 2024-02-28 Yuxia Wu , Yuan Fang , Lizi Liao

Gatys et al. recently demonstrated that deep networks can generate beautiful textures and stylized images from a single texture example. However, their methods requires a slow and memory-consuming optimization process. We propose here an…

计算机视觉与模式识别 · 计算机科学 2016-03-11 Dmitry Ulyanov , Vadim Lebedev , Andrea Vedaldi , Victor Lempitsky

Deep learning-based food image classification enables precise identification of food categories, further facilitating accurate nutritional analysis. However, real-world food images often show a skewed distribution, with some food types…

计算机视觉与模式识别 · 计算机科学 2025-06-03 GaYeon Koh , Hyun-Jic Oh , Jeonghyun Noh , Won-Ki Jeong

Access to individual-level health data is essential for gaining new insights and advancing science. In particular, modern methods based on artificial intelligence rely on the availability of and access to large datasets. In the health…

Phylogenetic networks represent evolutionary history of species and can record natural reticulate evolutionary processes such as horizontal gene transfer and gene recombination. This makes phylogenetic networks a more comprehensive…

种群与进化 · 定量生物学 2021-06-15 Remie Janssen , Pengyu Liu

Estimating the structure of directed acyclic graphs (DAGs) of features (variables) plays a vital role in revealing the latent data generation process and providing causal insights in various applications. Although there have been many…

机器学习 · 计算机科学 2024-03-06 Shaohua Fan , Shuyang Zhang , Xiao Wang , Chuan Shi

We consider the population dynamics of a set of species whose network of catalytic interactions is described by a directed graph. The relationship between the attractors of this dynamics and the underlying graph theoretic structures like…

adap-org · 物理学 2009-10-30 Sanjay Jain , Sandeep Krishna

Estimating three-dimensional conformations of a molecular graph allows insight into the molecule's biological and chemical functions. Fast generation of valid conformations is thus central to molecular modeling. Recent advances in…

机器学习 · 计算机科学 2025-02-18 Sohil Atul Shah , Vladlen Koltun

Dynamics of protein self-assembly on the inorganic surface and the resultant geometric patterns are visualized using high-speed atomic force microscopy. The time dynamics of the classical macroscopic descriptors such as 2D Fast Fourier…

Real-world networks in technology, engineering and biology often exhibit dynamics that cannot be adequately reproduced using network models given by smooth dynamical systems and a fixed network topology. Asynchronous networks give a…

动力系统 · 数学 2017-02-07 Christian Bick , Michael Field

In entomology and ecology research, biologists often need to collect a large number of insects, among which beetles are the most common species. A common practice for biologists to organize beetles is to place them on trays and take a…

Traditionally, learning the structure of a Dynamic Bayesian Network has been centralized, requiring all data to be pooled in one location. However, in real-world scenarios, data are often distributed across multiple entities (e.g.,…

机器学习 · 计算机科学 2025-02-07 Jianhong Chen , Ying Ma , Xubo Yue

The detection and classification of diseases in Robusta coffee leaves are essential to ensure that plants are healthy and the crop yield is kept high. However, this job requires extensive botanical knowledge and much wasted time. Therefore,…

计算机视觉与模式识别 · 计算机科学 2024-01-12 Adrian Gheorghiu , Iulian-Marius Tăiatu , Dumitru-Clementin Cercel , Iuliana Marin , Florin Pop

We present Federated Timeline Synthesis (FTS), a novel framework for training generative foundation models across distributed timeseries data applied to electronic health records (EHR). At its core, FTS represents patient history as…

机器学习 · 计算机科学 2025-07-01 Pawel Renc , Michal K. Grzeszczyk , Linglong Qian , Nassim Oufattole , Jeff Rasley , Arkadiusz Sitek

Artificially evolving foraging behavior in simulated legged animals has proved to be a notoriously difficult task. Here, we co-evolve the morphology and controller for virtual organisms in a three-dimensional physically realistic…

神经与进化计算 · 计算机科学 2011-12-22 Nicolas Chaumont , Christoph Adami

Recent advancements in large language models (LLMs) have significantly enhanced their knowledge and generative capabilities, leading to a surge of interest in leveraging LLMs for high-quality data synthesis. However, synthetic data…

机器学习 · 计算机科学 2025-06-11 Ying Zhou , Xinyao Wang , Yulei Niu , Yaojie Shen , Lexin Tang , Fan Chen , Ben He , Le Sun , Longyin Wen

Baker's yeast (Saccharomyces cerevisiae) is a model organism for studying the morphology that emerges at the scale of multi-cell colonies. To look at how morphology develops, we collect a dataset of time-lapse photographs of the growth of…

定量方法 · 定量生物学 2022-06-07 Andy Goldschmidt , James Kunert-Graf , Adrian C. Scott , Zhihao Tan , Aimée M. Dudley , J. Nathan Kutz

Training deep learning models that generalize well to live deployment is a challenging problem in the financial markets. The challenge arises because of high dimensionality, limited observations, changing data distributions, and a low…

统计金融 · 定量金融 2019-12-20 Brandon Da Silva , Sylvie Shang Shi

Deep neural networks have become prevalent in human analysis, boosting the performance of applications, such as biometric recognition, action recognition, as well as person re-identification. However, the performance of such networks scales…

计算机视觉与模式识别 · 计算机科学 2022-08-22 Indu Joshi , Marcel Grimmer , Christian Rathgeb , Christoph Busch , Francois Bremond , Antitza Dantcheva