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Light harvesting by photosystem II (PSII) in plants is highly efficient and acclimates to rapid changes in the intensity of sunlight. However, the mechanisms of PSII light harvesting have remained experimentally inaccessible. Using a…

生物物理 · 物理学 2016-04-27 Kapil Amarnath , Doran I. G. Bennett , Anna R. Schneider , Graham R. Fleming

The investigation of energy transfer properties in photosynthetic multi-protein networks gives insight into their underlying design principles.Here, we discuss excitonic energy transfer mechanisms of the photosystem II (PS-II)…

生物物理 · 物理学 2015-02-11 Christoph Kreisbeck , Alán Aspuru-Guzik

Photosystems II and I (PSII and PSI) are the reaction centre complexes that drive the light reactions of photosynthesis. PSII performs light-driven water oxidation (quantum efficiencies and catalysis rates of up to 80% and 1000…

Photosystem II (PSII) reaction center is a unique protein-chromophore complex that is capable of efficiently separating electronic charges across the membrane after photoexcitation. In the PSII reaction center, the primary energy- and…

The hotness of the sun and the coldness of the outer space are inexhaustible thermodynamic resources for human beings. From a thermodynamic point of view, any energy conversion systems that receive energy from the sun and/or dissipate…

应用物理 · 物理学 2018-05-08 Bolin Liao

In this work we study the first step in photosynthesis for the limiting case of a single photon interacting with photosystem II (PSII). We model our system using quantum trajectory theory, which allows us to consider not only the average…

生物物理 · 物理学 2022-08-10 Robert L. Cook , Liwen Ko , K. Birgitta Whaley

In green plants, chlorophyll-a and chlorophyll-b are the predominant pigments bound to light-harvesting proteins. While the individual characteristics of these chlorophylls are well understood, the advantages of their coexistence remain…

数据分析、统计与概率 · 物理学 2024-07-17 Eunchul Kim , Daekyung Lee , Souichi Sakamoto , Ju-Yeon Jo , Mauricio Vargas , Akihito Ishizaki , Jun Minagawa , Heetae Kim

An important determinant of crop yields is the regulation of photosystem II (PSII) light harvesting by energy-dependent quenching (qE). However, the molecular details of excitation quenching have not been quantitatively connected to the…

生物物理 · 物理学 2022-06-08 Doran I. G. Bennett , Graham R. Fleming , Kapil Amarnath

Biology offers a boundless source of adaptation, innovation, and inspiration. A wide range of photosynthetic organisms exist that are capable of harvesting solar light in an exceptionally efficient way, using abundant and low-cost…

生物大分子 · 定量生物学 2015-12-16 Tjaart P. J. Krüger , Rienk van Grondelle

The energy-transfer efficiency of the natural photosynthesis system seems to be perfectly optimized during the evolution for millions of years. However, how to enhance the efficiency in the artificial light-harvesting systems is still…

光学 · 物理学 2025-12-30 Jun Wang , Rui Li , Yi Li , Kai-Ya Zhang , Qing Ai

Revealing the role of quantum entanglement in charge-transport in the Photosystem II reaction center (PSII RC) is of great significance. In this work, we theoretically demonstrate that the robust quantum entanglement provides regulatory…

化学物理 · 物理学 2025-01-14 Ling-Fang Li , Shun-Cai Zhao , Lu-Xin Xu

In this study, the theoretical maximum efficiency $\eta_{max}$ and the Boltzmann-type factor giving the concentration ratio of excited-to-ground state pigment-molecules for photosynthetic systems under irradiation with arbitrary photon flux…

统计力学 · 物理学 2025-12-17 Tetsuo Yabuki

We model and simulate the performance of charge-transfer in nonphotochemical quenching (NPQ) in the CP29 light-harvesting antenna-complex associated with photosystem II (PSII). The model consists of five discrete excitonic energy states and…

生物物理 · 物理学 2016-03-23 Gennady P. Berman , Alexander I. Nesterov , Richard T. Sayre , Susanne Still

Despite several different measures of efficiency that are applicable to the photosynthetic systems, a precise degree of efficiency of these systems is not completely determined. Introducing an efficient model for the dynamics of…

化学物理 · 物理学 2020-06-24 Fatemeh Ghasemi , Afshin Shafiee

As most biological species, photosynthetic lifeforms have evolved to function optimally, despite thermal disorder and with fault tolerance. It remains a challenge to understand how this is achieved. To address this challenge the function of…

生物物理 · 物理学 2007-05-23 Melih K. Sener , Deyu Lu , Thorsten Ritz , Sanghyun Park , Petra Fromme , Klaus Schulten

Configurational entropy is an important factor in the free energy change of many macromolecular recognition and binding processes, and has been intensively studied. Despite great progresses that have been made, the global sampling remains…

生物物理 · 物理学 2012-12-04 Wenzhao Li , Kai Wang , Suyan Tian , Pu Tian

The thermodynamic definition of entropy can be extended to nonequilibrium systems based on its relation to information. To apply this definition in practice requires access to the physical system's microstates, which may be prohibitively…

统计力学 · 物理学 2020-08-21 Gil Ariel , Haim Diamant

We address the role of topology in the energy transport process that occurs in networks of photosynthetic complexes. We take inspiration from light harvesting networks present in purple bacteria and simulate an incoherent dissipative energy…

生物物理 · 物理学 2013-05-30 Michele Allegra , Paolo Giorda

Finding better solutions to combinatorial optimization problems could have a large positive impact on many real-world application areas, such as logistics. For this reason, significant efforts have been made to design novel optimisation…

This study formulates the ideal efficiency of light-powered systems in the most general form, based on the first principle of energy-entropy flow analysis under the condition of zero entropy generation within the system. A unified formula…

综合物理 · 物理学 2025-12-17 Tetsuo Yabuki
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