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A plant growth simulation can be characterized as a reconstructed visual representation of a plant or plant system. The phenotypic characteristics and plant structures are controlled by the scene environment and other contextual attributes.…

计算机视觉与模式识别 · 计算机科学 2024-09-23 Mohamed Debbagh , Yixue Liu , Zhouzhou Zheng , Xintong Jiang , Shangpeng Sun , Mark Lefsrud

Modeling environmental ecosystems is essential for effective resource management, sustainable development, and understanding complex ecological processes. However, traditional methods frequently struggle with the inherent complexity,…

机器学习 · 计算机科学 2025-03-06 Runlong Yu , Shengyu Chen , Yiqun Xie , Xiaowei Jia

We developed a simulator to quantify the effect of changes in environmental parameters on plant growth in precision farming. Our approach combines the processing of plant images with deep convolutional neural networks (CNN), growth curve…

系统与控制 · 电气工程与系统科学 2022-12-07 J. Amacker , T. Kleiven , M. Grigore , P. Albrecht , C. Horn

Plant phenotyping (Guo et al. 2021; Pieruschka et al. 2019) focuses on studying the diverse traits of plants related to the plants' growth. To be more specific, by accurately measuring the plant's anatomical, ontogenetical, physiological…

机器学习 · 计算机科学 2022-01-17 Jun Wu , Elizabeth A. Ainsworth , Sheng Wang , Kaiyu Guan , Jingrui He

Accurate reconstruction of plant models for phenotyping analysis is critical for optimising sustainable agricultural practices in precision agriculture. Traditional laboratory-based phenotyping, while valuable, falls short of understanding…

机器人学 · 计算机科学 2024-02-16 Yaoqiang Pan , Kewei Hu , Tianhao Liu , Chao Chen , Hanwen Kang

With the advancement of GPS and remote sensing technologies, large amounts of geospatial and spatiotemporal data are being collected from various domains, driving the need for effective and efficient prediction methods. Given spatial data…

机器学习 · 计算机科学 2020-12-25 Zhe Jiang

Modeling environmental ecosystems is essential for effective resource management, sustainable development, and understanding complex ecological processes. However, traditional data-driven methods face challenges in capturing inherently…

机器学习 · 计算机科学 2025-04-08 Runlong Yu , Shengyu Chen , Yiqun Xie , Huaxiu Yao , Jared Willard , Xiaowei Jia

Deep Learning has recently emerged as a perfect prognosis downscaling technique to compute high-resolution fields from large-scale coarse atmospheric data. Despite their promising results to reproduce the observed local variability, they…

机器学习 · 计算机科学 2023-05-03 Jose González-Abad , Jorge Baño-Medina , Ignacio Heredia Cachá

Generative models aim to learn the distribution of observed data by generating new instances. With the advent of neural networks, deep generative models, including variational autoencoders (VAEs), generative adversarial networks (GANs), and…

计算机视觉与模式识别 · 计算机科学 2023-08-29 Zifan Shi , Sida Peng , Yinghao Xu , Andreas Geiger , Yiyi Liao , Yujun Shen

Generative modeling has become a central paradigm in protein research, extending machine learning beyond structure prediction toward sequence design, backbone generation, inverse folding, and biomolecular interaction modeling. However, the…

机器学习 · 计算机科学 2026-03-30 Senura Hansaja Wanasekara , Minh-Duong Nguyen , Xiaochen Liu , Nguyen H. Tran , Ken-Tye Yong

Quantifying organism-level phenotypes, such as growth dynamics and biomass accumulation, is fundamental to understanding agronomic traits and optimizing crop production. However, quality growing data of plants at scale is difficult to…

定量方法 · 定量生物学 2025-07-10 Adam J Riesselman , Evan M Cofer , Therese LaRue , Wim Meeussen

Understanding how cellular morphology, gene expression, and spatial context jointly shape tissue function is a central challenge in biology. Image-based spatial transcriptomics technologies now provide high-resolution measurements of cell…

定量方法 · 定量生物学 2026-02-17 Zhenglun Kong , Mufan Qiu , John Boesen , Xiang Lin , Sukwon Yun , Tianlong Chen , Manolis Kellis , Marinka Zitnik

With the global population increasing and arable land resources becoming increasingly limited, smart and precision agriculture have emerged as essential directions for sustainable agricultural development. Artificial intelligence (AI),…

机器学习 · 计算机科学 2025-10-15 Xing Hu , Haodong Chen , Qianqian Duan , Dawei Zhang

Farmers frequently assess plant growth and performance as basis for making decisions when to take action in the field, such as fertilization, weed control, or harvesting. The prediction of plant growth is a major challenge, as it is…

计算机视觉与模式识别 · 计算机科学 2023-12-07 Lukas Drees , Laura Verena Junker-Frohn , Jana Kierdorf , Ribana Roscher

Local climate information is crucial for impact assessment and decision-making, yet coarse global climate simulations cannot capture small-scale phenomena. Current statistical downscaling methods infer these phenomena as temporally…

机器学习 · 计算机科学 2025-09-24 Jonathan Schmidt , Luca Schmidt , Felix Strnad , Nicole Ludwig , Philipp Hennig

Plasticity-led evolution is a form of evolution where a change in the environment induces novel traits via phenotypic plasticity, after which the novel traits are genetically accommodated over generations under the novel environment. This…

种群与进化 · 定量生物学 2023-01-18 Eden Tian Hwa Ng , Akira R. Kinjo

We consider the problem of modeling, estimating, and controlling the latent state of a spatiotemporally evolving continuous function using very few sensor measurements and actuator locations. Our solution to the problem consists of two…

系统与控制 · 计算机科学 2015-08-11 Hassan A. Kingravi , Harshal Maske , Girish Chowdhary

In model-based reinforcement learning, generative and temporal models of environments can be leveraged to boost agent performance, either by tuning the agent's representations during training or via use as part of an explicit planning…

Biological systems commonly exhibit complex spatiotemporal patterns whose underlying generative mechanisms pose a significant analytical challenge. Traditional approaches to spatiodynamic inference rely on dimensionality reduction through…

定量方法 · 定量生物学 2025-08-01 Jun Won Park , Kangyu Zhao , Sanket Rane

Statistical and mathematical modeling are crucial to describe, interpret, compare and predict the behavior of complex biological systems including the organization of hematopoietic stem and progenitor cells in the bone marrow environment.…

定量方法 · 定量生物学 2018-09-07 Walter de Back , Thomas Zerjatke , Ingo Roeder
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