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Reductions in natural habitats urge that we better understand species' interconnection and how biological communities respond to environmental changes. However, ecological studies of species' interactions are limited by their geographic and…

统计方法学 · 统计学 2023-02-21 Georgia Papadogeorgou , Carolina Bello , Otso Ovaskainen , David B. Dunson

Joint Species Distribution Models are essential for understanding how ecological drivers shape species communities. However, most existing approaches are limited by rigid parametric distributions for count data and the inability to model…

统计方法学 · 统计学 2025-12-05 Lukas Graz , Luisa Barbanti , Roland Brandl , Torsten Hothorn

Determining spatial distributions of species and communities are key objectives of ecology and conservation. Joint species distribution models use multi-species detection-nondetection data to estimate species and community distributions.…

应用统计 · 统计学 2022-12-15 Jeffrey W. Doser , Andrew O. Finley , Sudipto Banerjee

Climate change is a major driver of biodiversity loss, changing the geographic range and abundance of many species. However, there remain significant knowledge gaps about the distribution of species, due principally to the amount of effort…

计算机视觉与模式识别 · 计算机科学 2023-05-03 Mélisande Teng , Amna Elmustafa , Benjamin Akera , Hugo Larochelle , David Rolnick

Over the last few decades, ecologists have come to appreciate that key ecological patterns, which describe ecological communities at relatively large spatial scales, are not only scale dependent, but also intimately intertwined. The…

种群与进化 · 定量生物学 2016-09-13 Fabio Peruzzo , Sandro Azaele

Joint species distribution models are popular in ecology for modeling covariate effects on species occurrence, while characterizing cross-species dependence. Data consist of multivariate binary indicators of the occurrences of different…

统计方法学 · 统计学 2025-07-08 Federica Stolf , David B. Dunson

Accurately identifying spatial patterns of species distribution is crucial for scientific insight and societal benefit, aiding our understanding of species fluctuations. The increasing quantity and quality of ecological datasets present…

Ecological and conservation studies monitoring bird communities typically rely on species classification based on bird vocalizations. Historically, this has been based on expert volunteers going into the field and making lists of the bird…

统计方法学 · 统计学 2026-05-29 Haoxuan Wang , Patrik Lauha , David B. Dunson

One of the first beings affected by changes in the climate are trees, one of our most vital resources. In this study tree species interaction and the response to climate in different ecological environments is observed by applying a joint…

种群与进化 · 定量生物学 2019-10-14 Hyun Choi , Ali Sadeghian , Sergio Marconi , Ethan White , Daisy Zhe Wang

There is no much doubt that biotic interactions shape community assembly and ultimately the spatial co-variations between species. There is a hope that the signal of these biotic interactions can be observed and retrieved by investigating…

Accurate biodiversity monitoring is essential for effective environmental policy, yet current practices often rely on arbitrarily defined ecosystems, communities, and ad-hoc indicator species, limiting cost-efficiency and reproducibility.…

应用统计 · 统计学 2025-12-02 Braden Scherting , Otso Ovaskainen , Tomas Roslin , David B. Dunson

Biodiversity is declining at an unprecedented rate, impacting ecosystem services necessary to ensure food, water, and human health and well-being. Understanding the distribution of species and their habitats is crucial for conservation…

Joint species distribution modeling is attracting increasing attention these days, acknowledging the fact that individual level modeling fails to take into account expected dependence/interaction between species. These models attempt to…

统计方法学 · 统计学 2019-08-27 Alan E. Gelfand , Shinichiro Shirota

Understanding how species persist under interacting stressors is a central challenge in ecology. We develop a spatially explicit reaction-diffusion framework to investigate competing species in landscapes shaped by climate variability,…

种群与进化 · 定量生物学 2026-02-02 Ton Viet Ta

The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

种群与进化 · 定量生物学 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

Predicting species persistence within ecological communities is a fundamental challenge for both empirical and theoretical ecology. Existing methods span from mechanistic models, whose parameters are difficult to estimate from data, to…

Improved monitoring and associated inferential tools to efficiently identify declining bird populations, particularly of rare or sparsely distributed species, is key to informed conservation and management across large spatio-temporal…

种群与进化 · 定量生物学 2021-09-07 Jeffrey W. Doser , Aaron S. Weed , Elise F. Zipkin , Kathryn M. Miller , Andrew O. Finley

We present a new methodology to model total abundance by merging count data information from surveys with different sampling protocols. The proposed methods are used for data from national breeding bird monitoring programs in Norway and…

We propose a model of multispecies populations surviving on distributed resources. System dynamics are investigated under changes in abiotic factors such as the climate, as parameterized through environmental temperature. In particular, we…

种群与进化 · 定量生物学 2017-10-25 I. Sudakov , S. A. Vakulenko , D. Kirievskaya , K. M. Golden

We develop an theoretical approach for predicting biodiversity in multi-dimensional niche spaces, arising due to ecological drivers such as competitive exclusion. The novelty of our approach relies on the fact that ecological niches are…

种群与进化 · 定量生物学 2015-06-11 Tommaso Biancalani , Lee DeVille , Nigel Goldenfeld
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