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Molecular dynamics simulations provide theoretical insight into the microscopic behavior of materials in condensed phase and, as a predictive tool, enable computational design of new compounds. However, because of the large temporal and…

化学物理 · 物理学 2020-06-18 Wujie Wang , Rafael Gómez-Bombarelli

We present a detailed derivation and testing of our approach to rescale the dynamics of mesoscale simulations of coarse-grained polymer melts (I. Y. Lyubimov et al. J. Chem. Phys. \textbf{132}, 11876, 2010). Starting from the…

软凝聚态物质 · 物理学 2015-05-27 I. Y. Lyubimov , M. G. Guenza

Atomic diffusion affects the properties of various engineering materials, which predominantly occur in the polycrystalline state. A rigorous description of polycrystalline diffusion must therefore account for crystallographic defects,…

材料科学 · 物理学 2025-10-21 Lena Scholz , Yongliang Ou , Blazej Grabowski , Felix Fritzen

Almost all the polymer crystals have several polymorphic modifications. Their structure and existence conditions, as well as transitions between them are not understood even in the case of the 'model' polymer polyethylene (PE). For analysis…

材料科学 · 物理学 2011-09-06 Elena A. Zubova , Alexander V. Savin , Nikolay K. Balabaev

Extended Lagrangian molecular dynamics (XLMD) is a general method for performing molecular dynamics simulations using quantum and classical many-body potentials. Recently several new XLMD schemes have been proposed and tested on several…

数值分析 · 数学 2020-02-28 Dong An , Sara Y. Cheng , Teresa Head-Gordon , Lin Lin , Jianfeng Lu

We report theoretical and simulation studies of phase coexistence in model globular protein solutions, based on short-range, central, pair potential representations of the interaction among macro-particles. After reviewing our previous…

软凝聚态物质 · 物理学 2009-11-10 G. Pellicane , D. Costa , C. Caccamo

We present a simple and computationally efficient coarse-grained and solvent-free model for simulating lipid bilayer membranes. In order to be used in concert with particle-based reaction-diffusion simulations, the model is purely based on…

生物物理 · 物理学 2018-01-31 Mohsen Sadeghi , Thomas R. Weikl , Frank Noé

In this study, a coarse-graining framework for discrete models is formulated on the basis of multiscale homogenization. The discrete model considered in this paper is the Lattice Discrete Particle Model (LDPM), which simulates concrete at…

材料科学 · 物理学 2018-04-24 Erol Lale , Roozbeh Rezakhani , Mohammed Alnaggar , Gianluca Cusatis

Two coarse-grained models for polymer chains in dense glass-forming polymer melts are studied by computer simulation: the bond-fluctuation model on a simple cubic lattice, where a bond-length potential favors long bonds, is treated by…

软凝聚态物质 · 物理学 2007-05-23 K. Binder , J. Baschnagel , C. Bennemann , W. Paul

The coupled dynamics of entangled polymers which span a broad time and length scales govern the unique viscoelastic properties of polymers. To follow chain mobility by numerical simulations from the intermediate Rouse and reptation regimes…

软凝聚态物质 · 物理学 2016-11-03 Gary S. Grest

We present a theoretical approach to scale the artificially fast dynamics of simulated coarse-grained polymer liquids down to its realistic value. As coarse-graining affects entropy and dissipation, two factors enter the rescaling:…

软凝聚态物质 · 物理学 2015-05-27 I. Y. Lyubimov , J. McCarty , A. Clark , M. G. Guenza

We propose a coarse-grained model for polymer chains and polymer networks based on the meso-scale dynamics. The model takes the internal degrees of freedom of the constituent polymer chains into account using memory functions and colored…

软凝聚态物质 · 物理学 2008-04-01 Takashi Shibata , Hidemitsu Furukawa , Toshihiro Kawakatsu

A simple and predictive model is put forward explaining the experimentally observed substantial shift of the glass transition temperature, Tg, of sufficiently thin polymer films. It focuses on the limit of small molecular weight, where…

软凝聚态物质 · 物理学 2009-11-07 Stephan Herminghaus , Karin Jacobs , Ralf Seemann

In this paper, we consider the quasi-gas-dynamic (QGD) model in a multiscale environment. The model equations can be regarded as a hyperbolic regularization and are derived from kinetic equations. So far, the research on QGD models has been…

数值分析 · 数学 2021-06-30 Boris Chetverushkin , Eric Chung , Yalchin Efendiev , Sai-Mang Pun , Zecheng Zhang

This research paper comprehensively explores the effects of molecular weight and chain architecture on the interfacial and thermodynamic properties of cyclic and linear polymer blends. Utilizing the Kremer-Grest bead-spring model, the study…

软凝聚态物质 · 物理学 2025-07-11 Oluwatumininu Emmanuel Ayo-Ojo , Nkosinathi Dlamini

The electrophoretic behaviour of flexible polyelectrolyte chains ranging from single monomers up to long fragments of hundred repeat units is studied by a mesoscopic simulation approach. Abstracting from the atomistic details of the…

软凝聚态物质 · 物理学 2015-05-13 Kai Grass , Christian Holm

Machine learning (ML) models for predicting gas permeability through polymers have traditionally relied on experimental data. While these models exhibit robustness within familiar chemical domains, reliability wanes when applied to new…

材料科学 · 物理学 2024-06-24 Brandon K. Phan , Kuan-Hsuan Shen , Rishi Gurnani , Huan Tran , Ryan Lively , Rampi Ramprasad

Through extensive molecular simulations we determine a phase diagram of attractive, flexible polymer chains in two and three dimensions. A surprisingly rich collection of distinct crystal morphologies appear, which can be finely tuned…

We propose a new model for the description of complex granular particles and their interaction in molecular dynamics simulations of granular material in two dimensions. The grains are composed of triangles which are connected by deformable…

adap-org · 物理学 2012-08-29 Thorsten Poeschel , Volkhard Buchholtz

We present a stochastic simulator for polycrystalline phase-change materials capable of spatio-temporal modelling of complex anneals. This is based on consideration of bulk and surface energies to generate rates of growth and decay of…

计算物理 · 物理学 2007-09-21 Peter Ashwin , Patnaik BSV , C. David Wright
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