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Graph embedding maps a graph into a convenient vector-space representation for graph analysis and machine learning applications. Many graph embedding methods hinge on a sampling of context nodes based on random walks. However, random walks…

机器学习 · 计算机科学 2021-10-18 Sadamori Kojaku , Jisung Yoon , Isabel Constantino , Yong-Yeol Ahn

Recently, the emerging graph Transformers have made significant advancements for node classification on graphs. In most graph Transformers, a crucial step involves transforming the input graph into token sequences as the model input,…

机器学习 · 计算机科学 2024-06-28 Jinsong Chen , Siyu Jiang , Kun He

Traditional Graph Self-Supervised Learning (GSSL) struggles to capture complex structural properties well. This limitation stems from two main factors: (1) the inadequacy of conventional Graph Neural Networks (GNNs) in representing…

机器学习 · 计算机科学 2025-02-25 Asiri Wijesinghe , Hao Zhu , Piotr Koniusz

The automorphism groups of various linear codes are extensively studied yielding insights into the respective code structure. This knowledge is used in, e.g., theoretical analysis and in improving decoding performance, motivating the…

信息论 · 计算机科学 2024-04-16 Jonathan Mandelbaum , Sisi Miao , Holger Jäkel , Laurent Schmalen

The representation learning on textual graph is to generate low-dimensional embeddings for the nodes based on the individual textual features and the neighbourhood information. Recent breakthroughs on pretrained language models and graph…

计算与语言 · 计算机科学 2023-10-10 Junhan Yang , Zheng Liu , Shitao Xiao , Chaozhuo Li , Defu Lian , Sanjay Agrawal , Amit Singh , Guangzhong Sun , Xing Xie

Recently, transformers have shown promising performance in learning graph representations. However, there are still some challenges when applying transformers to real-world scenarios due to the fact that deep transformers are hard to train…

机器学习 · 计算机科学 2022-05-13 Sixiao Zhang , Hongxu Chen , Haoran Yang , Xiangguo Sun , Philip S. Yu , Guandong Xu

Graph machine learning, particularly using graph neural networks, heavily relies on node features. However, many real-world systems, such as social and biological networks, lack node features due to privacy concerns, incomplete data, or…

机器学习 · 计算机科学 2025-06-10 Anwar Said , Waseem Abbas , Xenofon Koutsoukos

Recent years have witnessed a surge of interest in machine learning on graphs and networks with applications ranging from vehicular network design to IoT traffic management to social network recommendations. Supervised machine learning…

社会与信息网络 · 计算机科学 2019-08-23 Manoj Reddy Dareddy , Mahashweta Das , Hao Yang

We establish connections between the Transformer architecture, originally introduced for natural language processing, and Graph Neural Networks (GNNs) for representation learning on graphs. We show how Transformers can be viewed as message…

机器学习 · 计算机科学 2025-06-30 Chaitanya K. Joshi

Several recent works use positional encodings to extend the receptive fields of graph neural network (GNN) layers equipped with attention mechanisms. These techniques, however, extend receptive fields to the complete graph, at substantial…

机器学习 · 计算机科学 2023-12-14 Rickard Brüel-Gabrielsson , Mikhail Yurochkin , Justin Solomon

This article aims to study the topological invariant properties encoded in node graph representational embeddings by utilizing tools available in persistent homology. Specifically, given a node embedding representation algorithm, we…

机器学习 · 计算机科学 2021-10-12 Mustafa Hajij , Ghada Zamzmi , Xuanting Cai

Contemporary graph learning algorithms are not well-defined for large molecules since they do not consider the hierarchical interactions among the atoms, which are essential to determine the molecular properties of macromolecules. In this…

机器学习 · 计算机科学 2023-08-02 Nhat Khang Ngo , Truong Son Hy , Risi Kondor

Despite the success of Transformers on language understanding, code generation, and logical reasoning, they still fail to generalize over length on basic arithmetic tasks such as addition and multiplication. A major reason behind this…

机器学习 · 计算机科学 2024-06-05 Mahdi Sabbaghi , George Pappas , Hamed Hassani , Surbhi Goel

Knowledge graphs enable data scientists to learn end-to-end on heterogeneous knowledge. However, most end-to-end models solely learn from the relational information encoded in graphs' structure: raw values, encoded as literal nodes, are…

机器学习 · 计算机科学 2023-09-06 W. X. Wilcke , P. Bloem , V. de Boer , R. H. van t Veer

Homomorphic encryption (HE)---the ability to perform computation on encrypted data---is an attractive remedy to increasing concerns about data privacy in deep learning (DL). However, building DL models that operate on ciphertext is…

密码学与安全 · 计算机科学 2019-04-03 Fabian Boemer , Yixing Lao , Rosario Cammarota , Casimir Wierzynski

We propose a generalization of transformer neural network architecture for arbitrary graphs. The original transformer was designed for Natural Language Processing (NLP), which operates on fully connected graphs representing all connections…

机器学习 · 计算机科学 2021-01-26 Vijay Prakash Dwivedi , Xavier Bresson

Computing latent representations for graph-structured data is an ubiquitous learning task in many industrial and academic applications ranging from molecule synthetization to social network analysis and recommender systems. Knowledge graphs…

神经与进化计算 · 计算机科学 2023-08-25 Victor Caceres Chian , Marcel Hildebrandt , Thomas Runkler , Dominik Dold

Most existing popular methods for learning graph embedding only consider fixed-order global structural features and lack structures hierarchical representation. To address this weakness, we propose a novel graph embedding algorithm named…

机器学习 · 计算机科学 2021-02-03 Xue Liu , Wei Wei , Xiangnan Feng , Xiaobo Cao , Dan Sun

Large Language Models (LLMs) have shown remarkable capabilities in processing various data structures, including graphs. While previous research has focused on developing textual encoding methods for graph representation, the emergence of…

机器学习 · 计算机科学 2024-09-16 Zhiqiang Zhong , Davide Mottin

We propose the Graph Context Encoder (GCE), a simple but efficient approach for graph representation learning based on graph feature masking and reconstruction. GCE models are trained to efficiently reconstruct input graphs similarly to a…

机器学习 · 计算机科学 2021-06-21 Oriel Frigo , Rémy Brossard , David Dehaene