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Quantifying sarcomere structure organization in human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) is crucial for understanding cardiac disease pathology, improving drug screening, and advancing regenerative medicine.…

计算机视觉与模式识别 · 计算机科学 2024-10-29 Huyen Le , Khiet Dang , Tien Lai , Nhung Nguyen , Mai Tran , Hieu Pham

In cardiac cells, structural organization is an important indicator of cell maturity and healthy function. Healthy cardiomyocytes exhibit well-aligned morphology with densely packed and organized sarcomeres. Immature or diseased…

定量方法 · 定量生物学 2025-02-03 Saeed Mohammadzadeh , Emma Lejeune

A better fundamental understanding of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) has the potential to advance applications ranging from drug discovery to cardiac repair. Automated quantitative analysis of beating…

定量方法 · 定量生物学 2021-11-17 Bill Zhao , Kehan Zhang , Christopher S. Chen , Emma Lejeune

Timelapse images of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) provide rich information on cell structure and contractile function. However, it is challenging to reproducibly generate tissue samples and conduct…

定量方法 · 定量生物学 2025-11-18 Saeed Mohammadzadeh , Yao-Chang Tsan , Aaron Renberg , Hiba Kobeissi , Adam Helms , Emma Lejeune

Advancing human induced pluripotent stem cell derived cardiomyocyte (hiPSC-CM) technology will lead to significant progress ranging from disease modeling, to drug discovery, to regenerative tissue engineering. Yet, alongside these potential…

Modeling subsurface fluid flow in porous media is crucial for applications such as oil and gas exploration. However, the inherent heterogeneity and multi-scale characteristics of these systems pose significant challenges in accurately…

流体动力学 · 物理学 2026-03-04 Jie Chen , Peiqi Li , Zhengkang He , Simon Hands

We present the first geometric deep learning framework based on point cloud representation for 3D four-chamber cardiac reconstruction from cine MRI data. This work addresses a long-standing limitation in conventional cine MRI, which…

计算机视觉与模式识别 · 计算机科学 2025-12-02 Zhengda Ma , Abhirup Banerjee

According to Complementary Learning Systems (CLS) theory~\citep{mcclelland1995there} in neuroscience, humans do effective \emph{continual learning} through two complementary systems: a fast learning system centered on the hippocampus for…

机器学习 · 计算机科学 2021-10-04 Quang Pham , Chenghao Liu , Steven Hoi

The structural and functional maturation of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) is essential for application to pharmaceutical testing, disease modeling, and ultimately therapeutic use. Multicellular…

Fluorescence microscopy allows for a detailed inspection of cells, cellular networks, and anatomical landmarks by staining with a variety of carefully-selected markers visualized as color channels. Quantitative characterization of…

计算机视觉与模式识别 · 计算机科学 2021-08-26 Alvaro Gomariz , Tiziano Portenier , Patrick M. Helbling , Stephan Isringhausen , Ute Suessbier , César Nombela-Arrieta , Orcun Goksel

Medical image segmentation is a difficult but important task for many clinical operations such as cardiac bi-ventricular volume estimation. More recently, there has been a shift to utilizing deep learning and fully convolutional neural…

图像与视频处理 · 电气工程与系统科学 2020-03-17 Jesse Sun , Fatemeh Darbehani , Mark Zaidi , Bo Wang

Background: Image reconstruction from highly undersampled 4D flow MRI data can be very time consuming and may result in significant underestimation of velocities depending on regularization, thereby limiting the applicability of the method.…

医学物理 · 物理学 2025-04-01 Luuk Jacobs , Marco Piccirelli , Valery Vishnevskiy , Sebastian Kozerke

Enhancing the quality of low-light images plays a very important role in many image processing and multimedia applications. In recent years, a variety of deep learning techniques have been developed to address this challenging task. A…

图像与视频处理 · 电气工程与系统科学 2021-12-13 Long Ma , Risheng Liu , Jiaao Zhang , Xin Fan , Zhongxuan Luo

The deep convolutional neural networks have achieved significant improvements in accuracy and speed for single image super-resolution. However, as the depth of network grows, the information flow is weakened and the training becomes harder…

计算机视觉与模式识别 · 计算机科学 2018-02-27 Yanting Hu , Xinbo Gao , Jie Li , Yuanfei Huang , Hanzi Wang

Single-Photon Emission Computed Tomography (SPECT) is widely applied for the diagnosis of coronary artery diseases. Low-dose (LD) SPECT aims to minimize radiation exposure but leads to increased image noise. Limited-view (LV) SPECT, such as…

图像与视频处理 · 电气工程与系统科学 2024-01-25 Xiongchao Chen , Bo Zhou , Xueqi Guo , Huidong Xie , Qiong Liu , James S. Duncan , Albert J. Sinusas , Chi Liu

Accounting for inter-individual variability in brain function is key to precision medicine. Here, by considering functional inter-individual variability as meaningful data rather than noise, we introduce VarCoNet, an enhanced…

神经与进化计算 · 计算机科学 2025-10-06 Charalampos Lamprou , Aamna Alshehhi , Leontios J. Hadjileontiadis , Mohamed L. Seghier

Accurate fovea localization is essential for analyzing retinal diseases to prevent irreversible vision loss. While current deep learning-based methods outperform traditional ones, they still face challenges such as the lack of local…

计算机视觉与模式识别 · 计算机科学 2024-10-11 Sifan Song , Jinfeng Wang , Zilong Wang , Hongxing Wang , Jionglong Su , Xiaowei Ding , Kang Dang

Live-cell imaging of multiple subcellular structures is essential for understanding subcellular dynamics. However, the conventional multi-color sequential fluorescence microscopy suffers from significant imaging delays and limited number of…

亚细胞过程 · 定量生物学 2025-01-13 Mingyang Chen , Luhong Jin , Xuwei Xuan , Defu Yang , Yun Cheng , Ju Zhang

Deep Neural Networks (DNNs) face interpretability challenges due to their opaque internal representations. While Feature Map Convergence Evaluation (FMCE) quantifies module-level convergence via Feature Map Convergence Scores (FMCS), it…

计算机视觉与模式识别 · 计算机科学 2025-08-19 Zhibo Zhu , Renyu Huang , Lei He

Dual energy computed tomography (DECT) has become of particular interest in clinic recent years. The DECT scan comprises two images, corresponding to two photon attenuation coefficients maps of the objects. Meanwhile, the DECT images are…

医学物理 · 物理学 2017-11-21 Sui Li , Yongbo Wang , Yuting Liao , Ji He , Dong Zeng , Zhaoying Bian , Jianhua Ma
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