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The Hidden Markov Model (HMM) is a widely-used statistical model for handling sequential data. However, the presence of missing observations in real-world datasets often complicates the application of the model. The EM algorithm and Gibbs…

机器学习 · 统计学 2026-01-06 Dongrong Li , Tianwei Yu , Xiaodan Fan

The GMRES algorithm of Saad and Schultz (1986) is an iterative method for approximately solving linear systems $A{\bf x}={\bf b}$, with initial guess ${\bf x}_0$ and residual ${\bf r}_0 = {\bf b} - A{\bf x}_0$. The algorithm employs the…

数值分析 · 数学 2023-03-22 Stephen Thomas , Erin Carson , Miro Rozložník , Arielle Carr , Kasia Świrydowicz

Approximate inference in probability models is a fundamental task in machine learning. Approximate inference provides powerful tools to Bayesian reasoning, decision making, and Bayesian deep learning. The main goal is to estimate the…

机器学习 · 计算机科学 2020-03-10 Jun Han

In this work, we adopt a general framework based on the Gibbs posterior to update belief distributions for inverse problems governed by partial differential equations (PDEs). The Gibbs posterior formulation is a generalization of standard…

统计计算 · 统计学 2019-07-04 Zilong Zou , Sayan Mukherjee , Harbir Antil , Wilkins Aquino

We show that evolutionary computation can be implemented as standard Markov-chain Monte-Carlo (MCMC) sampling. With some care, `genetic algorithms' can be constructed that are reversible Markov chains that satisfy detailed balance; it…

种群与进化 · 定量生物学 2014-02-13 Chris Watkins , Yvonne Buttkewitz

State space models (SSMs) are widely used to describe dynamic systems. However, when the likelihood of the observations is intractable, parameter inference for SSMs cannot be easily carried out using standard Markov chain Monte Carlo or…

统计方法学 · 统计学 2023-12-21 Zhaoran Hou , Samuel W. K. Wong

We consider the efficient use of an approximation within Markov chain Monte Carlo (MCMC), with subsequent importance sampling (IS) correction of the Markov chain inexact output, leading to asymptotically exact inference. We detail…

统计计算 · 统计学 2019-04-15 Jordan Franks

We consider Bayesian inference from multiple time series described by a common state-space model (SSM) structure, but where different subsets of parameters are shared between different submodels. An important example is disease-dynamics,…

统计方法学 · 统计学 2022-10-17 Anna Wigren , Fredrik Lindsten

Gaussian graphical models (GGMs) are well-established tools for probabilistic exploration of dependence structures using precision matrices. We develop a Bayesian method to incorporate covariate information in this GGMs setup in a nonlinear…

Gaussian process (GP) models provide a powerful tool for prediction but are computationally prohibitive using large data sets. In such scenarios, one has to resort to approximate methods. We derive an approximation based on a composite…

机器学习 · 统计学 2018-02-02 Xiuming Liu , Dave Zachariah , Edith C. H. Ngai

In Bayesian inference, predictive distributions are typically in the form of samples generated via Markov chain Monte Carlo (MCMC) or related algorithms. In this paper, we conduct a systematic analysis of how to make and evaluate…

统计方法学 · 统计学 2020-06-25 Fabian Krüger , Sebastian Lerch , Thordis L. Thorarinsdottir , Tilmann Gneiting

Bayesian inference of Gibbs random fields (GRFs) is often referred to as a doubly intractable problem, since the likelihood function is intractable. The exploration of the posterior distribution of such models is typically carried out with…

统计计算 · 统计学 2017-10-16 Aidan Boland , Nial Friel , Florian Maire

We here consider the subset simulation method which approaches a failure event using a decreasing sequence of nested intermediate failure events. The method resembles importance sampling, which actively explores a probability space by…

统计计算 · 统计学 2020-03-16 Kenan Šehić , Mirza Karamehmedović

The cumulative shrinkage process is an increasing shrinkage prior that can be employed within models in which additional terms are supposed to play a progressively negligible role. A natural application is to Gaussian factor models, where…

统计计算 · 统计学 2020-08-13 Sirio Legramanti

We consider the problem of calibrating an imperfect computer model using experimental data. To compensate the misspecification of the computer model and make more accurate predictions, a discrepancy function is often included and modeled…

统计方法学 · 统计学 2018-05-04 Mengyang Gu , Long Wang

Ising and Potts models are an important class of discrete probability distributions which originated from statistical physics and since then have found applications in several disciplines. Simulation from these models is a well known…

统计计算 · 统计学 2026-03-17 Charles C. Margossian , Chenyang Zhong , Sumit Mukherjee

Bayesian shrinkage methods have generated a lot of recent interest as tools for high-dimensional regression and model selection. These methods naturally facilitate tractable uncertainty quantification and incorporation of prior information.…

统计方法学 · 统计学 2017-04-21 Bala Rajaratnam , Doug Sparks , Kshitij Khare , Liyuan Zhang

Kelly (2007, hereafter K07) described an efficient algorithm, using Gibbs sampling, for performing linear regression in the fairly general case where non-zero measurement errors exist for both the covariates and response variables, where…

天体物理仪器与方法 · 物理学 2016-02-17 Adam B. Mantz

For spatial and network data, we consider models formed from a Markov random field (MRF) structure and the specification of a conditional distribution for each observation. Fast simulation from such MRF models is often an important…

统计计算 · 统计学 2019-11-18 Andee Kaplan , Mark S. Kaiser , Soumendra N. Lahiri , Daniel J. Nordman

Many probabilistic models introduce strong dependencies between variables using a latent multivariate Gaussian distribution or a Gaussian process. We present a new Markov chain Monte Carlo algorithm for performing inference in models with…

统计计算 · 统计学 2010-03-22 Iain Murray , Ryan Prescott Adams , David J. C. MacKay