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In order to resist the adverse effect of viewpoint variations for improving vehicle re-identification performance, we design quadruple directional deep learning networks to extract quadruple directional deep learning features (QD-DLF) of…

计算机视觉与模式识别 · 计算机科学 2018-11-14 Jianqing Zhu , Huanqiang Zeng , Jingchang Huang , Shengcai Liao , Zhen Lei , Canhui Cai , LiXin Zheng

Predictive modeling over relational databases (RDBs) powers applications, yet remains challenging due to capturing both cross-table dependencies and complex feature interactions. Relational Deep Learning (RDL) methods automate feature…

机器学习 · 计算机科学 2026-02-27 Zhikai Chen , Han Xie , Jian Zhang , Jiliang Tang , Xiang Song , Huzefa Rangwala

Proteins are essential for life, and their structure determines their function. The protein secondary structure is formed by the folding of the protein primary structure, and the protein tertiary structure is formed by the bending and…

生物大分子 · 定量生物学 2024-03-11 Yanlin Zhou , Kai Tan , Xinyu Shen , Zheng He , Haotian Zheng

As proteins with similar structures often have similar functions, analysis of protein structures can help predict protein functions and is thus important. We consider the problem of protein structure classification, which computationally…

机器学习 · 统计学 2019-10-08 Hongyu Guo , Khalique Newaz , Scott Emrich , Tijana Milenkovic , Jun Li

Most visual recognition studies rely heavily on crowd-labelled data in deep neural networks (DNNs) training, and they usually train a DNN for each single visual recognition task, leading to a laborious and time-consuming visual recognition…

计算机视觉与模式识别 · 计算机科学 2024-02-19 Jingyi Zhang , Jiaxing Huang , Sheng Jin , Shijian Lu

Decision-Focused Learning (DFL) is an emerging learning paradigm that tackles the task of training a machine learning (ML) model to predict missing parameters of an incomplete optimization problem, where the missing parameters are…

机器学习 · 计算机科学 2025-06-23 Yehya Farhat

Deep neural decision forest (NDF) achieved remarkable performance on various vision tasks via combining decision tree and deep representation learning. In this work, we first trace the decision-making process of this model and visualize…

计算机视觉与模式识别 · 计算机科学 2019-04-22 Shichao Li , Kwang-Ting Cheng

For protein sequence datasets, unlabeled data has greatly outpaced labeled data due to the high cost of wet-lab characterization. Recent deep-learning approaches to protein prediction have shown that pre-training on unlabeled data can yield…

机器学习 · 计算机科学 2020-12-02 Pascal Sturmfels , Jesse Vig , Ali Madani , Nazneen Fatema Rajani

Protein interactions are important in a broad range of biological processes. Traditionally, computational methods have been developed to automatically predict protein interface from hand-crafted features. Recent approaches employ deep…

机器学习 · 计算机科学 2020-07-21 Yi Liu , Hao Yuan , Lei Cai , Shuiwang Ji

Decision-focused learning (DFL) is an emerging paradigm that integrates machine learning (ML) and constrained optimization to enhance decision quality by training ML models in an end-to-end system. This approach shows significant potential…

机器学习 · 计算机科学 2024-09-05 Jayanta Mandi , James Kotary , Senne Berden , Maxime Mulamba , Victor Bucarey , Tias Guns , Ferdinando Fioretto

Directionality in molecular and biomolecular networks plays a significant role in the accurate represention of the complex, dynamic, and asymmetrical nature of interactions present in protein-ligand binding, signal transduction, and…

生物大分子 · 定量生物学 2024-11-08 Mushal Zia , Benjamin Jones , Hongsong Feng , Guo-Wei Wei

Predicting protein properties such as solvent accessibility and secondary structure from its primary amino acid sequence is an important task in bioinformatics. Recently, a few deep learning models have surpassed the traditional window…

机器学习 · 计算机科学 2016-05-11 Zeming Lin , Jack Lanchantin , Yanjun Qi

Molecular property prediction constitutes a cornerstone of drug discovery and materials science, necessitating models capable of disentangling complex structure-property relationships across diverse molecular modalities. Existing approaches…

机器学习 · 计算机科学 2026-03-24 Long Xu , Junping Guo , Jianbo Zhao , Jianbo Lu , Yuzhong Peng

Pre-trained vision-language models (VLMs), such as CLIP, have demonstrated impressive capability in visual tasks, but their fine-tuning often suffers from bias in class-imbalanced scene. Recent works have introduced large language models…

计算机视觉与模式识别 · 计算机科学 2025-08-22 Yongju Jia , Jiarui Ma , Xiangxian Li , Baiqiao Zhang , Xianhui Cao , Juan Liu , Yulong Bian

Protein function prediction is a crucial task in bioinformatics, with significant implications for understanding biological processes and disease mechanisms. While the relationship between sequence and function has been extensively…

定量方法 · 定量生物学 2024-09-04 Shania Mitra , Lei Huang , Manolis Kellis

Rapid development of big data and high-performance computing have encouraged explosive studies of deep learning in geoscience. However, most studies only take single-type data as input, frittering away invaluable multisource, multi-scale…

机器学习 · 计算机科学 2020-05-19 Zhenyu Yuan , Yuxin Jiang , Jingjing Li , Handong Huang

Convolutional neural networks have enabled major progresses in addressing pixel-level prediction tasks such as semantic segmentation, depth estimation, surface normal prediction and so on, benefiting from their powerful capabilities in…

计算机视觉与模式识别 · 计算机科学 2021-12-16 Guanglei Yang , Paolo Rota , Xavier Alameda-Pineda , Dan Xu , Mingli Ding , Elisa Ricci

In recent years, machine learning has been proposed as a promising strategy to build accurate scoring functions for computational docking finalized to numerically empowered drug discovery. However, the latest studies have suggested that…

定量方法 · 定量生物学 2023-02-17 F. Pellicani , D. Dal Ben , A. Perali , S. Pilati

Neoplasms (NPs) and neurological diseases and disorders (NDDs) are amongst the major classes of diseases underlying deaths of a disproportionate number of people worldwide. To determine if there exist some distinctive features in the local…

分子网络 · 定量生物学 2022-12-27 Vikram Singh , Vikram Singh

Many modern data mining applications are concerned with the analysis of datasets in which the observations are described by paired high-dimensional vectorial representations or "views". Some typical examples can be found in web mining and…

机器学习 · 统计学 2012-02-07 Brian McWilliams , Giovanni Montana