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Protein-protein interactions (PPIs) are crucial in regulating numerous cellular functions, including signal transduction, transportation, and immune defense. As the accuracy of multi-chain protein complex structure prediction improves, the…

生物大分子 · 定量生物学 2024-02-07 Chenqing Hua , Connor Coley , Guy Wolf , Doina Precup , Shuangjia Zheng

Data-driven methods have recently been developed to discover underlying partial differential equations (PDEs) of physical problems. However, for these methods, a complete candidate library of potential terms in a PDE are usually required.…

神经与进化计算 · 计算机科学 2020-08-26 Hao Xu , Haibin Chang , Dongxiao Zhang

Numerical software in computational science and engineering often relies on highly-optimized building blocks from libraries such as BLAS and LAPACK, and while such libraries provide portable performance for a wide range of computing…

数学软件 · 计算机科学 2019-06-21 Daniele G. Spampinato , Diego Fabregat-Traver , Markus Püschel , Paolo Bientinesi

Automated Machine Learning with ensembling (or AutoML with ensembling) seeks to automatically build ensembles of Deep Neural Networks (DNNs) to achieve qualitative predictions. Ensemble of DNNs are well known to avoid over-fitting but they…

机器学习 · 计算机科学 2022-08-31 Pierrick Pochelu , Serge G. Petiton , Bruno Conche

The de novo design of molecular structures using deep learning generative models introduces an encouraging solution to drug discovery in the face of the continuously increased cost of new drug development. From the generation of original…

生物大分子 · 定量生物学 2021-02-08 Yuemin Bian , Xiang-Qun Xie

Federated Learning (FL) has emerged as a powerful paradigm for decentralized model training, yet it remains vulnerable to deep leakage (DL) attacks that reconstruct private client data from shared model updates. While prior DL methods have…

计算机视觉与模式识别 · 计算机科学 2026-01-22 Isaac Baglin , Xiatian Zhu , Simon Hadfield

Deep learning has shown promising results on many machine learning tasks but DL models are often complex networks with large number of neurons and layers, and recently, complex layer structures known as building blocks. Finding the best…

机器学习 · 计算机科学 2018-01-29 Jayanta K Dutta , Jiayi Liu , Unmesh Kurup , Mohak Shah

Generative AI (GenAI) has revolutionized data-driven modeling by enabling the synthesis of high-dimensional data across various applications, including image generation, language modeling, biomedical signal processing, and anomaly…

机器学习 · 计算机科学 2025-09-09 Yao Xie , Xiuyuan Cheng

The growing adoption of Deep Learning (DL) applications in the Internet of Things has increased the demand for energy-efficient accelerators. Field Programmable Gate Arrays (FPGAs) offer a promising platform for such acceleration due to…

硬件体系结构 · 计算机科学 2025-04-15 Chao Qian

Generative Flow Networks (GFlowNets) have shown promising potential to generate high-scoring candidates with probability proportional to their rewards. As existing GFlowNets freely explore in state space, they encounter significant…

机器学习 · 计算机科学 2026-02-13 Xuan Yu , Xu Wang , Rui Zhu , Yudong Zhang , Yang Wang

The rapid development of the Internet and smart devices trigger surge in network traffic making its infrastructure more complex and heterogeneous. The predominated usage of mobile phones, wearable devices and autonomous vehicles are…

Protein family design emerges as a promising alternative by combining the advantages of de novo protein design and mutation-based directed evolution.In this paper, we propose ProfileBFN, the Profile Bayesian Flow Networks, for specifically…

生物大分子 · 定量生物学 2025-02-25 Jingjing Gong , Yu Pei , Siyu Long , Yuxuan Song , Zhe Zhang , Wenhao Huang , Ziyao Cao , Shuyi Zhang , Hao Zhou , Wei-Ying Ma

Coupled cluster Green's function (GFCC) calculation has drawn much attention in the recent years for targeting the molecular and material electronic structure problems from a many body perspective in a systematically improvable way.…

化学物理 · 物理学 2021-04-23 Bo Peng , Ajay Panyala , Karol Kowalski , Sriram Krishnamoorthy

Materials informatics (MI), emerging from the integration of materials science and data science, is expected to significantly accelerate material development and discovery. The data used in MI are derived from both computational and…

材料科学 · 物理学 2025-04-09 Yusuke Hashimoto , Xue Jia , Hao Li , Takaaki Tomai

As Deep Neural Networks (DNNs) have become an increasingly ubiquitous workload, the range of libraries and tooling available to aid in their development and deployment has grown significantly. Scalable, production quality tools are freely…

机器学习 · 计算机科学 2022-06-22 Perry Gibson , José Cano

Distributed deep learning systems (DDLS) train deep neural network models by utilizing the distributed resources of a cluster. Developers of DDLS are required to make many decisions to process their particular workloads in their chosen…

分布式、并行与集群计算 · 计算机科学 2020-07-09 Matthias Langer , Zhen He , Wenny Rahayu , Yanbo Xue

Although multigrid is asymptotically optimal for solving many important partial differential equations, its efficiency relies heavily on the careful selection of the individual algorithmic components. In contrast to recent approaches that…

计算工程、金融与科学 · 计算机科学 2026-03-19 Dinesh Parthasarathy , Wayne Mitchell , Arjun Gambhir , Harald Köstler , Ulrich Rüde

This paper studies Generative Flow Networks (GFlowNets), which learn to sample objects proportionally to a given reward function through the trajectory of state transitions. In this work, we observe that GFlowNets tend to under-exploit the…

机器学习 · 计算机科学 2024-10-30 Hyosoon Jang , Yunhui Jang , Minsu Kim , Jinkyoo Park , Sungsoo Ahn

Generative Flow Networks (GFlowNets; GFNs) are a class of generative models that learn to sample compositional objects proportionally to their a priori unknown value, their reward. We focus on the case where the reward has a specified,…

机器学习 · 计算机科学 2026-05-12 Alexandre Larouche , Audrey Durand

This paper investigates the intriguing question of whether we can create learning algorithms that automatically generate training data, learning environments, and curricula in order to help AI agents rapidly learn. We show that such…

机器学习 · 计算机科学 2019-12-18 Felipe Petroski Such , Aditya Rawal , Joel Lehman , Kenneth O. Stanley , Jeff Clune