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The segmentation of kidney layer structures, including cortex, outer stripe, inner stripe, and inner medulla within human kidney whole slide images (WSI) plays an essential role in automated image analysis in renal pathology. However, the…

图像与视频处理 · 电气工程与系统科学 2023-09-07 Muhao Liu , Chenyang Qi , Shunxing Bao , Quan Liu , Ruining Deng , Yu Wang , Shilin Zhao , Haichun Yang , Yuankai Huo

Comprehensive semantic segmentation on renal pathological images is challenging due to the heterogeneous scales of the objects. For example, on a whole slide image (WSI), the cross-sectional areas of glomeruli can be 64 times larger than…

图像与视频处理 · 电气工程与系统科学 2023-01-20 Ruining Deng , Quan Liu , Can Cui , Tianyuan Yao , Jun Long , Zuhayr Asad , R. Michael Womick , Zheyu Zhu , Agnes B. Fogo , Shilin Zhao , Haichun Yang , Yuankai Huo

Segmentation of microvascular structures, such as arterioles, venules, and capillaries, from human kidney whole slide images (WSI) has become a focal point in renal pathology. Current manual segmentation techniques are time-consuming and…

图像与视频处理 · 电气工程与系统科学 2023-08-14 Franklin Hu , Ruining Deng , Shunxing Bao , Haichun Yang , Yuankai Huo

Computer-assisted quantitative analysis on Giga-pixel pathology images has provided a new avenue in histology examination. The innovations have been largely focused on cancer pathology (i.e., tumor segmentation and characterization). In…

图像与视频处理 · 电气工程与系统科学 2022-03-24 Ruining Deng , Quan Liu , Can Cui , Zuhayr Asad , Haichun Yang , Yuankai Huo

Panoramic image segmentation in computational pathology presents a remarkable challenge due to the morphologically complex and variably scaled anatomy. For instance, the intricate organization in kidney pathology spans multiple layers, from…

图像与视频处理 · 电气工程与系统科学 2024-07-02 Ruining Deng , Quan Liu , Can Cui , Tianyuan Yao , Juming Xiong , Shunxing Bao , Hao Li , Mengmeng Yin , Yu Wang , Shilin Zhao , Yucheng Tang , Haichun Yang , Yuankai Huo

The renal vasculature, acting as a resource distribution network, plays an important role in both the physiology and pathophysiology of the kidney. However, no imaging techniques allow an assessment of the structure and function of the…

Partial nephrectomy (PN) is common surgery in urology. Digitization of renal anatomies brings much help to many computer-aided diagnosis (CAD) techniques during PN. However, the manual delineation of kidney vascular system and tumor on each…

图像与视频处理 · 电气工程与系统科学 2023-05-24 Nan Ma , Ying Yang , Dongkai Zhou

In the paper, we present an approach for learning a single model that universally segments 33 anatomical structures, including vertebrae, pelvic bones, and abdominal organs. Our model building has to address the following challenges.…

图像与视频处理 · 电气工程与系统科学 2022-03-07 Pengbo Liu , Yang Deng , Ce Wang , Yuan Hui , Qian Li , Jun Li , Shiwei Luo , Mengke Sun , Quan Quan , Shuxin Yang , You Hao , Honghu Xiao , Chunpeng Zhao , Xinbao Wu , S. Kevin Zhou

Accurate fine-grained segmentation of the renal vasculature is critical for nephrological analysis, yet it faces challenges due to diverse and insufficiently annotated images. Existing methods struggle to accurately segment intricate…

计算机视觉与模式识别 · 计算机科学 2025-02-11 Yitian Long , Zhongze Wu , Xiu Su , Lining Yu , Ruining Deng , Haichun Yang , Yuankai Huo

Deep-learning techniques have been used widely to alleviate the labour-intensive and time-consuming manual annotation required for pixel-level tissue characterization. Our previous study introduced an efficient single dynamic network -…

图像与视频处理 · 电气工程与系统科学 2023-05-25 Haoju Leng , Ruining Deng , Zuhayr Asad , R. Michael Womick , Haichun Yang , Lipeng Wan , Yuankai Huo

Due to the increasing availability of whole slide scanners facilitating digitization of histopathological tissue, there is a strong demand for the development of computer based image analysis systems. In this work, the focus is on the…

计算机视觉与模式识别 · 计算机科学 2020-04-24 Michael Gadermayr , Ann-Kathrin Dombrowski , Barbara Mara Klinkhammer , Peter Boor , Dorit Merhof

It remains challenging to automatically segment kidneys in clinical ultrasound images due to the kidneys' varied shapes and image intensity distributions, although semi-automatic methods have achieved promising performance. In this study,…

计算机视觉与模式识别 · 计算机科学 2019-01-09 Shi Yin , Zhengqiang Zhang , Hongming Li , Qinmu Peng , Xinge You , Susan L. Furth , Gregory E. Tasian , Yong Fan

Kidney volume is greatly affected in several renal diseases. Precise and automatic segmentation of the kidney can help determine kidney size and evaluate renal function. Fully convolutional neural networks have been used to segment organs…

图像与视频处理 · 电气工程与系统科学 2020-09-02 Omid Bazgir , Kai Barck , Richard A. D. Carano , Robby M. Weimer , Luke Xie

Application of machine learning techniques enables segmentation of functional tissue units in histology whole-slide images (WSIs). We built a pipeline to apply previously validated segmentation models of kidney structures and extract…

Self-supervised learning is emerging as an effective substitute for transfer learning from large datasets. In this work, we use kidney segmentation to explore this idea. The anatomical asymmetry of kidneys is leveraged to define an…

计算机视觉与模式识别 · 计算机科学 2021-01-15 Abhinav Dhere , Jayanthi Sivaswamy

Segmentation has long been essential in computer vision due to its numerous real-world applications. However, most traditional deep learning and machine learning models need help to capture geometric features such as size and convexity of…

图像与视频处理 · 电气工程与系统科学 2024-12-02 Huy Trinh , Khang Tran , Nam Nguyen , Tri Cao , Binh Nguyen

Pancreas segmentation has been traditionally challenging due to its small size in computed tomography abdominal volumes, high variability of shape and positions among patients, and blurred boundaries due to low contrast between the pancreas…

图像与视频处理 · 电气工程与系统科学 2025-05-22 Andrea Moglia , Matteo Cavicchioli , Luca Mainardi , Pietro Cerveri

Deep learning has become an extremely powerful tool for complex tasks such as image classification and segmentation. The medical industry often lacks high-quality, balanced datasets, which can be a challenge for deep learning algorithms…

图像与视频处理 · 电气工程与系统科学 2024-03-26 Muhammad Shoaib Farooq , Ayesha Tariq

Renal compartment segmentation on CT images targets on extracting the 3D structure of renal compartments from abdominal CTA images and is of great significance to the diagnosis and treatment for kidney diseases. However, due to the unclear…

图像与视频处理 · 电气工程与系统科学 2021-08-29 Song Wang , Yuting He , Youyong Kong , Xiaomei Zhu , Shaobo Zhang , Pengfei Shao , Jean-Louis Dillenseger , Jean-Louis Coatrieux , Shuo Li , Guanyu Yang

Segmentation from renal pathological images is a key step in automatic analyzing the renal histological characteristics. However, the performance of models varies significantly in different types of stained datasets due to the appearance…

图像与视频处理 · 电气工程与系统科学 2020-02-21 Ke Mei , Chuang Zhu , Lei Jiang , Jun Liu , Yuanyuan Qiao
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