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We study the segregation of motile semiflexible filaments from a background of similar but non-motile filaments. Our Langevin dynamics simulations reveal a wide range of emergent structures governed by filament flexibility and activity,…

软凝聚态物质 · 物理学 2025-12-22 Chitrak Bhowmik , Aparna Baskaran , Sriram Ramaswamy

Many motile microorganisms react to environmental light cues with a variety of motility responses guiding cells towards better conditions for survival and growth. The use of spatial light modulators could help to elucidate the mechanisms of…

Actuation remains a signifcant challenge in soft robotics. Actuation by light has important advantages: objects can be actuated from a distance, distinct frequencies can be used to actuate and control distinct modes with minimal…

软凝聚态物质 · 物理学 2019-09-09 Kevin Korner , Basile Audoly , Kaushik Bhattacharya

A fundamental issue in biology is the nature of evolutionary transitions from unicellular to multicellular organisms. Volvocine algae are models for this transition, as they span from the unicellular biflagellate Chlamydomonas to…

细胞行为 · 定量生物学 2022-07-22 K. C. Leptos , M. Chioccioli , S. Furlan , A. I. Pesci , R. E. Goldstein

Photosynthetic eukaryotes show a remarkable variability in photosynthesis, including large differences in light harvesting proteins and pigment composition. In vivo circular spectropolarimetry enables us to probe the molecular architecture…

生物大分子 · 定量生物学 2018-08-27 C. H. Lucas Patty , Freek Ariese , Wybren Jan Buma , Inge Loes ten Kate , Rob J. M. van Spanning , Frans Snik

We use moving light patterns to control the motion of {\it Escherichia coli} bacteria whose motility is photo-activated. Varying the pattern speed controls the magnitude and direction of the bacterial flux, and therefore the accumulation of…

Flagella allow eukaryotic cells to move and pump fluid. We present the first three-dimensional, time-resolved imaging of the flagellar waveform of Chlamydomonas reinhardtii, a model alga found in fresh water. During the power stroke, we…

生物物理 · 物理学 2022-10-18 Laurence G. Wilson , Martin A. Bees

We present a self-consistent theory, as well as an illustrative application to a realistic system, of phase control of photoabsorption in an optically dense medium. We demonstrate that, when propagation effects are taken into consideration,…

量子物理 · 物理学 2009-11-06 David Petrosyan , P. Lambropoulos

In this fluid dynamics video, we demonstrate the microscale mixing enhancement of passive tracer particles in suspensions of swimming microalgae, Chlamydomonas reinhardtii. These biflagellated, single-celled eukaryotes (10 micron diameter)…

We present a fast, high-throughput method for characterizing the motility of microorganisms in 3D based on standard imaging microscopy. Instead of tracking individual cells, we analyse the spatio-temporal fluctuations of the intensity in…

The recent interest in using microorganisms for biofuels is motivation enough to study bioconvection and cell dispersion in tubes subject to imposed flow. To optimize light and nutrient uptake, many microorganisms swim in directions biased…

软凝聚态物质 · 物理学 2010-10-05 O. A. Croze , E. E. Ashraf , M. A. Bees

We theoretically study mixtures of chemically-interacting particles, which produce or consume a chemical to which they are attracted or repelled, in the most general case of many coexisting species. We find a new class of active phase…

软凝聚态物质 · 物理学 2019-07-15 Jaime Agudo-Canalejo , Ramin Golestanian

The selective entrapment of mutually annihilating species within a phase-changing carrier fluid is explored by both analytical and numerical means. The model takes full account of the dynamic heterogeneity which arises as a result of the…

计算物理 · 物理学 2020-06-22 Sauro Succi , Andrea Montessori , Giacomo Falcucci

We explore in this paper the phenomenon of photofocusing: a coupling between flow vorticity and biased swimming of microalgae toward a light source that produces a focusing of the microswimmer suspension. We combine experiments that…

软凝聚态物质 · 物理学 2016-05-25 Matthieu Martin , Alexandre Barzyk , Eric Bertin , Philippe Peyla , Salima Rafai

We study the distribution of swimming micro-organisms advected by a model turbulent flow and attracted towards a localised light source through phototaxis. It is shown that particles aggregate along a dynamical attractor with fractal…

数学物理 · 物理学 2009-11-13 Colin Torney , Zoltan Neufeld

We exhibit the strong influence on light propagation of the finite size in photonic band-gap material. We show that light emission can be controlled by the symmetry group of the boundary of the finite device. These results lead simply to…

光学 · 物理学 2009-11-06 Emmanuel Centeno , Didier Felbacq

We investigate the phase separation in one-dimensional Fermi gases on optical lattices. The density distributions and the magnetization are calculated by means of density-matrix renormalization method. The phase separation between spin-up…

量子气体 · 物理学 2015-05-18 A-Hai Chen , Gao Xianlong

We present a generic mechanism by which reproducing microorganisms, with a diffusivity that depends on the local population density, can form stable patterns. It is known that a decrease of swimming speed with density can promote separation…

种群与进化 · 定量生物学 2010-07-13 M. E. Cates , D. Marenduzzo , I. Pagonabarraga , J. Tailleur

The primary objective of this article is to explore how rotation influences the initiation of phototactic bioconvection. This investigation is conducted through the application of linear stability theory to a suspension composed of…

软凝聚态物质 · 物理学 2023-09-21 S. K. Rajput

Active particles (living or synthetic) often move through inhomogeneous environments, such as gradients in light, heat or nutrient concentration, that can lead to directed motion (or taxis). Recent research has explored inhomogeneity in the…

软凝聚态物质 · 物理学 2022-08-23 Jiahao Gong , Vaseem A. Shaik , Gwynn J. Elfring