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Large-scale biodiversity monitoring platforms increasingly rely on multimodal wildlife observations. While recent foundation models enable rich semantic representations across vision, audio, and language, retrieving relevant observations…

Data-driven navigation algorithms are critically dependent on large-scale, high-quality real-world data collection for successful training and robust performance in realistic and uncontrolled conditions. To enhance the growing family of…

BioImageLoader (BIL) is a python library that handles bioimage datasets for machine learning applications, easing simple workflows and enabling complex ones. BIL attempts to wrap the numerous and varied bioimages datasets in unified…

定量方法 · 定量生物学 2023-03-07 Seongbin Lim , Xingjian Zhang , Emmanuel Beaurepaire , Anatole Chessel

Understanding the performance of machine learning models across diverse data distributions is critically important for reliable applications. Motivated by this, there is a growing focus on curating benchmark datasets that capture…

机器学习 · 计算机科学 2022-02-15 Weixin Liang , James Zou

Chatbots such as GPT-4 and ChatGPT are now serving millions of users. Despite their widespread use, there remains a lack of public datasets showcasing how these tools are used by a population of users in practice. To bridge this gap, we…

计算与语言 · 计算机科学 2024-05-03 Wenting Zhao , Xiang Ren , Jack Hessel , Claire Cardie , Yejin Choi , Yuntian Deng

Metagenomics offers a way to analyze biotopes at the genomic level and to reach functional and taxonomical conclusions. The bio-analyzes of large metagenomic projects face critical limitations: complex metagenomes cannot be assembled and…

基因组学 · 定量生物学 2015-11-30 Maillet Nicolas , Collet Guillaume , Vanier Thomas , Lavenier Dominique , Pierre Peterlongo

Artificial Intelligence (AI) is revolutionizing biodiversity research by enabling advanced data analysis, species identification, and habitats monitoring, thereby enhancing conservation efforts. Ensuring reproducibility in AI-driven…

The increasing amount of research data provides the opportunity to link and integrate data to create novel hypotheses, to repeat experiments or to compare recent data to data collected at a different time or place. However, recent studies…

信息检索 · 计算机科学 2021-06-09 Felicitas Löffler , Valentin Wesp , Birgitta König-Ries , Friederike Klan

Background: Simulated nucleotide or amino acid sequences are frequently used to assess the performance of phylogenetic reconstruction methods. BEAST, a Bayesian statistical framework that focuses on reconstructing time-calibrated molecular…

种群与进化 · 定量生物学 2013-12-18 Filip Bielejec , Philippe Lemey , Luiz Max Carvalho , Guy Baele , Andrew Rambaut , Marc A. Suchard

The use of gait for person identification has important advantages such as being non-invasive, unobtrusive, not requiring cooperation and being less likely to be obscured compared to other biometrics. Existing methods for gait recognition…

计算机视觉与模式识别 · 计算机科学 2021-12-20 Adrian Cosma , Emilian Radoi

This paper investigates the evaluation of dense 3D face reconstruction from a single 2D image in the wild. To this end, we organise a competition that provides a new benchmark dataset that contains 2000 2D facial images of 135 subjects as…

计算机视觉与模式识别 · 计算机科学 2018-04-24 Zhen-Hua Feng , Patrik Huber , Josef Kittler , Peter JB Hancock , Xiao-Jun Wu , Qijun Zhao , Paul Koppen , Matthias Rätsch

Biodiversity data are substantially increasing, spurred by technological advances and community (citizen) science initiatives. To integrate data is, likewise, becoming more commonplace. Open science promotes open sharing and data usage.…

其他定量生物学 · 定量生物学 2024-05-31 Carrie Andrew , Sharif Islam , Claus Weiland , Dag Endresen

General Instance Re-identification is a very important task in the computer vision, which can be widely used in many practical applications, such as person/vehicle re-identification, face recognition, wildlife protection, commodity tracing,…

计算机视觉与模式识别 · 计算机科学 2020-07-16 Lingxiao He , Xingyu Liao , Wu Liu , Xinchen Liu , Peng Cheng , Tao Mei

The task of redescription mining explores ways to re-describe different subsets of entities contained in a dataset and to reveal non-trivial associations between different subsets of attributes, called views. This interesting and…

机器学习 · 计算机科学 2024-10-30 Matej Mihelčić , Tomislav Šmuc

Smile detection from unconstrained facial images is a specialized and challenging problem. As one of the most informative expressions, smiles convey basic underlying emotions, such as happiness and satisfaction, which lead to multiple…

计算机视觉与模式识别 · 计算机科学 2018-02-08 Xin Guo , Luisa F. Polanía , Kenneth E. Barner

Monocular RGB cameras mounted on drones are widely used for wildlife monitoring, yet most analytical pipelines remain confined to two-dimensional image space, leaving geometric information in video underexploited. We present WildLIFT, a…

计算机视觉与模式识别 · 计算机科学 2026-04-28 Vandita Shukla , Fabio Remondino , Blair Costelloe , Benjamin Risse

The ability to visually re-identify objects is a fundamental capability in vision systems. Oftentimes, it relies on collections of visual signatures based on descriptors, such as SIFT or SURF. However, these traditional descriptors were…

机器学习 · 计算机科学 2020-04-02 Martin Robert , Patrick Dallaire , Philippe Giguère

As data are generated more and more from multiple disparate sources, multiview data sets, where each sample has features in distinct views, have ballooned in recent years. However, no comprehensive package exists that enables…

Affective computing for animals is a rapidly expanding research area that is going deeper than automated movement tracking to address animal internal states, like pain and emotions. Facial expressions can serve to communicate information…

计算机视觉与模式识别 · 计算机科学 2024-05-21 George Martvel , Greta Abele , Annika Bremhorst , Chiara Canori , Nareed Farhat , Giulia Pedretti , Ilan Shimshoni , Anna Zamansky

The convergence of IoT sensing, edge computing, and machine learning is transforming precision livestock farming. Yet bioacoustic data streams remain underused because of computational complexity and ecological validity challenges. We…

声音 · 计算机科学 2025-10-17 Mayuri Kate , Suresh Neethirajan