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This study investigates the feasibility of automating clinical coding in Russian, a language with limited biomedical resources. We present a new dataset for ICD coding, which includes diagnosis fields from electronic health records (EHRs)…

International Classification of Diseases (ICD) coding is the task of assigning ICD diagnosis codes to clinical notes. This can be challenging given the large quantity of labels (nearly 9,000) and lengthy texts (up to 8,000 tokens). However,…

计算与语言 · 计算机科学 2023-09-19 Junwen Duan , Han Jiang , Ying Yu

Clinical patient notes are critical for documenting patient interactions, diagnoses, and treatment plans in medical practice. Ensuring accurate evaluation of these notes is essential for medical education and certification. However, manual…

计算与语言 · 计算机科学 2024-01-25 Jingyu Xu , Yifeng Jiang , Bin Yuan , Shulin Li , Tianbo Song

Prediction of medical codes from clinical notes is both a practical and essential need for every healthcare delivery organization within current medical systems. Automating annotation will save significant time and excessive effort spent by…

计算与语言 · 计算机科学 2021-07-23 Byung-Hak Kim , Varun Ganapathi

In the domain of software development, LLMs have been utilized to automate tasks such as code translation, where source code from one programming language is translated to another while preserving its functionality. However, LLMs often…

软件工程 · 计算机科学 2025-11-03 Manojit Chakraborty , Madhusudan Ghosh , Rishabh Gupta

The integration of large language models (LLMs) into automated algorithm design has shown promising potential. A prevalent approach embeds LLMs within search routines to iteratively generate and refine candidate algorithms. However, most…

机器学习 · 计算机科学 2026-05-20 Fei Liu , Rui Zhang , Xi Lin , Zhichao Lu , Qingfu Zhang

Large scale veterinary clinical records can become a powerful resource for patient care and research. However, clinicians lack the time and resource to annotate patient records with standard medical diagnostic codes and most veterinary…

计算与语言 · 计算机科学 2018-09-05 Allen Nie , Ashley Zehnder , Rodney L. Page , Arturo L. Pineda , Manuel A. Rivas , Carlos D. Bustamante , James Zou

Medical coding is essential for standardizing clinical data and communication but is often time-consuming and prone to errors. Traditional Natural Language Processing (NLP) methods struggle with automating coding due to the large label…

Patients frequently seek information during their medical journeys, but the rising volume of digital patient messages has strained healthcare systems. Large language models (LLMs) offer promise in generating draft responses for clinicians,…

人机交互 · 计算机科学 2025-11-26 Rahul Sharma , Pragnya Ramjee , Kaushik Murali , Mohit Jain

This study presents a novel two-stage Retrieve-Rank system for automated ICD-10-CM medical coding, comparing its performance against a Vanilla Large Language Model (LLM) approach. Evaluating both systems on a dataset of 100 single-term…

信息检索 · 计算机科学 2024-07-19 Keith Kwan

In-context learning (ICL), teaching a large language model (LLM) to perform a task with few-shot demonstrations rather than adjusting the model parameters, has emerged as a strong paradigm for using LLMs. While early studies primarily used…

计算与语言 · 计算机科学 2023-05-24 Man Luo , Xin Xu , Zhuyun Dai , Panupong Pasupat , Mehran Kazemi , Chitta Baral , Vaiva Imbrasaite , Vincent Y Zhao

Medical coding converts free-text clinical notes into standardized diagnostic and procedural codes, which are essential for billing, hospital operations, and medical research. Unlike ordinary text classification, it requires multi-step…

人工智能 · 计算机科学 2025-11-18 Jiyang Zheng , Islam Nassar , Thanh Vu , Xu Zhong , Yang Lin , Tongliang Liu , Long Duong , Yuan-Fang Li

Mapping clinical documents to standardised clinical vocabularies is an important task, as it provides structured data for information retrieval and analysis, which is essential to clinical research, hospital administration and improving…

计算与语言 · 计算机科学 2025-09-15 Mingyang Li , Viktor Schlegel , Tingting Mu , Warren Del-Pinto , Goran Nenadic

The biomedical field relies heavily on concept linking in various areas such as literature mining, graph alignment, information retrieval, question-answering, data, and knowledge integration. Although large language models (LLMs) have made…

计算与语言 · 计算机科学 2023-07-04 Qinyong Wang , Zhenxiang Gao , Rong Xu

The reuse of historical clinical trial data has significant potential to accelerate medical research and drug development. However, interoperability challenges, particularly with missing medical codes, hinders effective data integration…

Large language models (LLMs) have demonstrated notable potential in medical applications, yet they face substantial challenges in handling complex real-world clinical diagnoses using conventional prompting methods. Current prompt…

Medical image analysis is essential in modern healthcare. Deep learning has redirected research focus toward complex medical multimodal tasks, including report generation and visual question answering. Traditional task-specific models often…

计算机视觉与模式识别 · 计算机科学 2025-09-15 Yiming Shi , Shaoshuai Yang , Xun Zhu , Haoyu Wang , Xiangling Fu , Miao Li , Ji Wu

Large language models (LLMs) have shown remarkable capabilities in Natural Language Processing (NLP), especially in domains where labeled data is scarce or expensive, such as clinical domain. However, to unlock the clinical knowledge hidden…

计算与语言 · 计算机科学 2023-09-18 Sonish Sivarajkumar , Mark Kelley , Alyssa Samolyk-Mazzanti , Shyam Visweswaran , Yanshan Wang

Large language models (LLMs) have exhibited striking in-context learning (ICL) ability to adapt to target tasks with a few input-output demonstrations. For better ICL, different methods are proposed to select representative demonstrations…

计算与语言 · 计算机科学 2023-10-24 Wei-Lin Chen , Cheng-Kuang Wu , Yun-Nung Chen , Hsin-Hsi Chen

Labeling training datasets has become a key barrier to building medical machine learning models. One strategy is to generate training labels programmatically, for example by applying natural language processing pipelines to text reports…