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The introduction of Large Language Models (LLMs), and the vast volume of publicly available medical data, amplified the application of NLP to the medical domain. However, LLMs are pretrained on data that are not explicitly relevant to the…

计算与语言 · 计算机科学 2023-12-12 Chris Solomou

Large language models (LLMs) have performed well across various clinical natural language processing tasks, despite not being directly trained on electronic health record (EHR) data. In this work, we examine how popular open-source LLMs…

计算与语言 · 计算机科学 2025-05-26 Furong Jia , David Sontag , Monica Agrawal

The work in this paper evaluates zero-shot and few-shot large language models (LLMs) for safety-critical clinical action extraction using the CLIP discharge-note dataset, with particular emphasis on transitions of care and post-discharge…

人工智能 · 计算机科学 2026-05-08 Shivali Dalmia , Ananya Mantravadi , Prasanna Desikan

Recent advancements in large language models (LLMs) have led to the development of highly potent models like OpenAI's ChatGPT. These models have exhibited exceptional performance in a variety of tasks, such as question answering, essay…

计算与语言 · 计算机科学 2023-04-12 Ruixiang Tang , Xiaotian Han , Xiaoqian Jiang , Xia Hu

Combinatorial medication recommendation(CMR) is a fundamental task of healthcare, which offers opportunities for clinical physicians to provide more precise prescriptions for patients with intricate health conditions, particularly in the…

人工智能 · 计算机科学 2025-01-14 Jie Tan , Yu Rong , Kangfei Zhao , Tian Bian , Tingyang Xu , Junzhou Huang , Hong Cheng , Helen Meng

The field of healthcare has increasingly turned its focus towards Large Language Models (LLMs) due to their remarkable performance. However, their performance in actual clinical applications has been underexplored. Traditional evaluations…

We compare the use of LSTM-based and CNN-based character-level word embeddings in BiLSTM-CRF models to approach chemical and disease named entity recognition (NER) tasks. Empirical results over the BioCreative V CDR corpus show that the use…

计算与语言 · 计算机科学 2018-08-28 Zenan Zhai , Dat Quoc Nguyen , Karin Verspoor

Large language models (LLMs) have achieved strong performance on medical exam-style tasks, motivating growing interest in their deployment in real-world clinical settings. However, clinical decision-making is inherently safety-critical,…

计算与语言 · 计算机科学 2026-04-13 Xiaohan Ren , Chenxiao Fan , Wenyin Ma , Hongliang He , Chongming Gao , Xiaoyan Zhao , Fuli Feng

Early detection of suicide risk from social media text is crucial for timely intervention. While Large Language Models (LLMs) offer promising capabilities in this domain, challenges remain in terms of interpretability and computational…

计算与语言 · 计算机科学 2025-02-27 Carter Adams , Caleb Carter , Jackson Simmons

How can we interpret and retrieve medical evidence to support clinical decisions? Clinical trial reports (CTR) amassed over the years contain indispensable information for the development of personalized medicine. However, it is practically…

计算与语言 · 计算机科学 2023-10-31 Maël Jullien , Marco Valentino , Hannah Frost , Paul O'Regan , Donal Landers , André Freitas

Scientific research indicates that for every hour spent in direct patient care, physicians spend nearly two additional hours on administrative tasks, particularly on electronic health records (EHRs) and desk work. This excessive…

计算与语言 · 计算机科学 2025-09-25 Hui Yi Leong , Yi Fan Gao , Ji Shuai , Yang Zhang , Uktu Pamuksuz

Oral drugs are becoming increasingly common in oncology care. In contrast to intravenous chemotherapy, which is administered in the clinic and carefully tracked via structure electronic health records (EHRs), oral drug treatment is…

计算与语言 · 计算机科学 2018-12-04 Monica Agrawal , Griffin Adams , Nathan Nussbaum , Benjamin Birnbaum

Background: Natural Language Processing (NLP) is widely used to extract clinical insights from Electronic Health Records (EHRs). However, the lack of annotated data, automated tools, and other challenges hinder the full utilisation of NLP…

计算与语言 · 计算机科学 2023-06-23 Elias Hossain , Rajib Rana , Niall Higgins , Jeffrey Soar , Prabal Datta Barua , Anthony R. Pisani , Ph. D , Kathryn Turner}

Relation extraction (RE) aims to identify relations between entities mentioned in texts. Although large language models (LLMs) have demonstrated impressive in-context learning (ICL) abilities in various tasks, they still suffer from poor…

计算与语言 · 计算机科学 2024-04-30 Guozheng Li , Peng Wang , Wenjun Ke , Yikai Guo , Ke Ji , Ziyu Shang , Jiajun Liu , Zijie Xu

Recent advancements in large language models (LLMs) have shown promise in medical applications such as disease diagnosis and treatment planning. However, most existing medical LLMs struggle with the deep reasoning required for complex…

计算与语言 · 计算机科学 2025-07-31 Hongzhou Yu , Tianhao Cheng , Yingwen Wang , Wen He , Qing Wang , Ying Cheng , Yuejie Zhang , Rui Feng , Xiaobo Zhang

Joint entity-relation extraction is a critical task in transforming unstructured or semi-structured text into triplets, facilitating the construction of large-scale knowledge graphs, and supporting various downstream applications. Despite…

计算与语言 · 计算机科学 2025-02-14 Danni Feng , Runzhi Li , Jing Wang , Siyu Yan , Lihong Ma , Yunli Xing

In this research, we present our work participation for the DrugProt task of BioCreative VII challenge. Drug-target interactions (DTIs) are critical for drug discovery and repurposing, which are often manually extracted from the…

计算与语言 · 计算机科学 2021-11-09 Jehad Aldahdooh , Ziaurrehman Tanoli , Jing Tang

Clinical trials are central to medical progress because they help improve understanding of human health and the healthcare system. They play a key role in discovering new ways to detect, prevent, or treat diseases, and it is essential that…

计算与语言 · 计算机科学 2025-10-16 Surya Tejaswi Yerramsetty , Almas Fathimah

Unsupervised pretraining is an integral part of many natural language processing systems, and transfer learning with language models has achieved remarkable results in many downstream tasks. In the clinical application of medical code…

计算与语言 · 计算机科学 2022-06-03 Shaoxiong Ji , Matti Hölttä , Pekka Marttinen

Mining relationships between treatment(s) and medical problem(s) is vital in the biomedical domain. This helps in various applications, such as decision support system, safety surveillance, and new treatment discovery. We propose a deep…

机器学习 · 计算机科学 2018-07-02 Veera Raghavendra Chikka , Kamalakar Karlapalem