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Principal component analysis (PCA) is commonly used in genetics to infer and visualize population structure and admixture between populations. PCA is often interpreted in a way similar to inferred admixture proportions, where it is assumed…

统计方法学 · 统计学 2023-02-10 Jan van Waaij , Song Li , Genís Garcia-Erill , Anders Albrechtsen , Carsten Wiuf

We present a new straightforward principal component analysis (PCA) method based on the diagonalization of the weighted variance-covariance matrix through two spectral decomposition methods: power iteration and Rayleigh quotient iteration.…

天体物理仪器与方法 · 物理学 2014-12-16 Ludovic Delchambre

Principal component analysis (PCA) is one of the most widely used dimensionality reduction methods in scientific data analysis. In many applications, for additional interpretability, it is desirable for the factor loadings to be sparse,…

最优化与控制 · 数学 2017-12-05 Santanu S. Dey , Rahul Mazumder , Marco Molinaro , Guanyi Wang

We provide a probabilistic and infinitesimal view of how the principal component analysis procedure (PCA) can be generalized to analysis of nonlinear manifold valued data. Starting with the probabilistic PCA interpretation of the Euclidean…

统计理论 · 数学 2018-06-26 Stefan Sommer

Data reconciliation (DR) and Principal Component Analysis (PCA) are two popular data analysis techniques in process industries. Data reconciliation is used to obtain accurate and consistent estimates of variables and parameters from…

机器学习 · 计算机科学 2015-05-05 Shankar Narasimhan , Nirav Bhatt

Sparse principal component analysis (PCA) aims at mapping large dimensional data to a linear subspace of lower dimension. By imposing loading vectors to be sparse, it performs the double duty of dimension reduction and variable selection.…

机器学习 · 统计学 2024-01-17 Jasin Machkour , Arnaud Breloy , Michael Muma , Daniel P. Palomar , Frédéric Pascal

Dimension reduction is often an important step in the analysis of high-dimensional data. PCA is a popular technique to find the best low-dimensional approximation of high-dimensional data. However, classical PCA is very sensitive to…

统计计算 · 统计学 2019-01-14 Holger Cevallos-Valdiviezo , Stefan Van Aelst

Motivation: Although principal component analysis (PCA) is widely used for the dimensional reduction of biomedical data, interpretation of PCA results remains daunting. Most existing methods attempt to explain each principal component (PC)…

定量方法 · 定量生物学 2015-08-24 H. Robert Frost , Zhigang Li , Jason H. Moore

Traditional principal component analysis (PCA) is well known in high-dimensional data analysis, but it requires to express data by a matrix with observations to be continuous. To overcome the limitations, a new method called flexible PCA…

统计方法学 · 统计学 2021-08-17 Tonglin Zhang , Baijian Yang , Qianqian Song , Jing Su

High dimensional data can contain multiple scales of variance. Analysis tools that preferentially operate at one scale can be ineffective at capturing all the information present in this cross-scale complexity. We propose a multiscale joint…

机器学习 · 统计学 2022-03-15 Daniel Sousa , Christopher Small

Multimodal data provides heterogeneous information for a holistic understanding of the tumor microenvironment. However, existing AI models often struggle to harness the rich information within multimodal data and extract poorly…

机器学习 · 计算机科学 2025-09-17 Huajun Zhou , Fengtao Zhou , Jiabo Ma , Yingxue Xu , Xi Wang , Xiuming Zhang , Li Liang , Zhenhui Li , Hao Chen

Regularized variants of Principal Components Analysis, especially Sparse PCA and Functional PCA, are among the most useful tools for the analysis of complex high-dimensional data. Many examples of massive data, have both sparse and…

机器学习 · 统计学 2019-08-21 Genevera I. Allen , Michael Weylandt

Hyperspectral optical imaging provides rich spectral information for estimating continuous environmental and material parameters; however, its high dimensionality and strong feature correlation pose significant challenges for machine…

光学 · 物理学 2025-12-18 Parisa Parand , Mahmoud Samadpour

Conventional principal component analysis (PCA) finds a principal vector that maximizes the sum of second powers of principal components. We consider a generalized PCA that aims at maximizing the sum of an arbitrary convex function of…

机器学习 · 计算机科学 2019-11-19 Samuele Battaglino , Erdem Koyuncu

Principal Component Analysis (PCA) is a widely utilized technique for dimensionality reduction; however, its inherent lack of interpretability-stemming from dense linear combinations of all feature-limits its applicability in many domains.…

机器学习 · 计算机科学 2025-04-01 Loc Hoang Tran

Principal component analysis (PCA) is a fundamental technique for dimensionality reduction and denoising; however, its application to three-dimensional data with arbitrary orientations -- common in structural biology -- presents significant…

信号处理 · 电气工程与系统科学 2025-10-22 Michael Fraiman , Paulina Hoyos , Tamir Bendory , Joe Kileel , Oscar Mickelin , Nir Sharon , Amit Singer

Model-independent analysis (MIA) methods are generally useful for analysing complex systems in which relationships between the observables are non-trivial and noise is present. Principle Component Analysis (PCA) is one of MIA methods…

加速器物理 · 物理学 2015-06-17 Y. I. Kim , S. T. Boogert , Y. Honda , A. Lyapin , H. Park , N. Terunuma , T. Tauchi , J. Urakawa

Principal component analysis (PCA) is a popular dimension reduction technique for vector data. Factored PCA (FPCA) is a probabilistic extension of PCA for matrix data, which can substantially reduce the number of parameters in PCA while…

机器学习 · 统计学 2023-12-19 Xuan Ma , Jianhua Zhao , Yue Wang

A novel text data dimension reduction technique, called the tree-structured multi-linear principal component anal- ysis (TMPCA), is proposed in this work. Being different from traditional text dimension reduction methods that deal with the…

计算与语言 · 计算机科学 2018-02-27 Yuanhang Su , Yuzhong Huang , C. -C. Jay Kuo

Principal component analysis (PCA) is an essential algorithm for dimensionality reduction in many data science domains. We address the problem of performing a federated PCA on private data distributed among multiple data providers while…

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