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We introduce a novel framework for learning vector representations of tree-structured geometric data focusing on 3D vascular networks. Our approach employs two sequentially trained Transformer-based autoencoders. In the first stage, the…

图像与视频处理 · 电气工程与系统科学 2025-06-16 James Batten , Michiel Schaap , Matthew Sinclair , Ying Bai , Ben Glocker

We propose a novel machine learning strategy for studying neuroanatomical shape variation. Our model works with volumetric binary segmentation images, and requires no pre-processing such as the extraction of surface points or a mesh. The…

计算机视觉与模式识别 · 计算机科学 2024-10-30 Evan M. Yu , Mert R. Sabuncu

Automated segmentation of intracranial arteries on magnetic resonance angiography (MRA) allows for quantification of cerebrovascular features, which provides tools for understanding aging and pathophysiological adaptations of the…

图像与视频处理 · 电气工程与系统科学 2017-12-21 Li Chen , Yanjun Xie , Jie Sun , Niranjan Balu , Mahmud Mossa-Basha , Kristi Pimentel , Thomas S. Hatsukami , Jenq-Neng Hwang , Chun Yuan

Most of the intracranial aneurysms (ICA) occur on a specific portion of the cerebral vascular tree named the Circle of Willis (CoW). More particularly, they mainly arise onto fifteen of the major arterial bifurcations constituting this…

图像与视频处理 · 电气工程与系统科学 2023-08-30 Rafic Nader , Romain Bourcier , Florent Autrusseau

Accurate cerebrovascular segmentation from Magnetic Resonance Angiography (MRA) and Computed Tomography Angiography (CTA) is of great significance in diagnosis and treatment of cerebrovascular pathology. Due to the complexity and topology…

图像与视频处理 · 电气工程与系统科学 2024-11-22 Zhanqiang Guo , Yao Luan , Jianjiang Feng , Wangsheng Lu , Yin Yin , Guangming Yang , Jie Zhou

Automatic labelling of anatomical structures, such as coronary arteries, is critical for diagnosis, yet existing (non-deep learning) methods are limited by a reliance on prior topological knowledge of the expected tree-like structures. As…

图像与视频处理 · 电气工程与系统科学 2024-03-05 Yadan Li , Mohammad Ali Armin , Simon Denman , David Ahmedt-Aristizabal

Deep learning has been shown to produce state of the art results in many tasks in biomedical imaging, especially in segmentation. Moreover, segmentation of the cerebrovascular structure from magnetic resonance angiography is a challenging…

计算机视觉与模式识别 · 计算机科学 2018-12-06 Pedro Sanches , Cyril Meyer , Vincent Vigon , Benoît Naegel

The precise delineation of blood vessels in medical images is critical for many clinical applications, including pathology detection and surgical planning. However, fully-automated vascular segmentation is challenging because of the…

图像与视频处理 · 电气工程与系统科学 2024-09-20 Amine Sadikine , Bogdan Badic , Enzo Ferrante , Vincent Noblet , Pascal Ballet , Dimitris Visvikis , Pierre-Henri Conze

Accurate segmentation of cerebral vasculature and a quantitative assessment of cerebrovascular morphology is critical to various diagnostic and therapeutic purposes and is pertinent to studying brain health and disease. However, this is…

定量方法 · 定量生物学 2020-02-27 Aditi Deshpande , Nima Jamilpour , Bin Jiang , Chelsea Kidwell , Max Wintermark , Kaveh Laksari

Intracranial arteries are critical blood vessels that supply the brain with oxygenated blood. Intracranial artery labels provide valuable guidance and navigation to numerous clinical applications and disease diagnoses. Various machine…

图像与视频处理 · 电气工程与系统科学 2022-11-02 Yaxin Zhu , Peisheng Qian , Ziyuan Zhao , Zeng Zeng

Accurate anatomical labeling of intracranial arteries is essential for cerebrovascular diagnosis and hemodynamic analysis but remains time-consuming and subject to interoperator variability. We present a deep learning-based framework for…

We propose a deep learning-based automatic coronary artery tree centerline tracker (AuCoTrack) extending the vessel tracker by Wolterink (arXiv:1810.03143). A dual pathway Convolutional Neural Network (CNN) operating on multi-scale 3D…

图像与视频处理 · 电气工程与系统科学 2023-11-27 Zohaib Salahuddin , Matthias Lenga , Hannes Nickisch

We present CaravelMetrics, a computational framework for automated cerebrovascular analysis that models vessel morphology through skeletonization-derived graph representations. The framework integrates atlas-based regional parcellation,…

计算机视觉与模式识别 · 计算机科学 2026-05-20 Daniele Falcetta , Liane S. Canas , Lorenzo Suppa , Matteo Pentassuglia , Jon Cleary , Marc Modat , Sébastien Ourselin , Maria A. Zuluaga

Due to the lack of automated methods, to diagnose cerebrovascular disease, time-of-flight magnetic resonance angiography (TOF-MRA) is assessed visually, making it time-consuming. The commonly used encoder-decoder architectures for…

图像与视频处理 · 电气工程与系统科学 2024-06-21 Syed Farhan Abbas , Nguyen Thanh Duc , Yoonguu Song , Kyungwon Kim , Ekta Srivastava , Boreom Lee

Despite decades of research, understanding human manipulation activities is, and has always been, one of the most attractive and challenging research topics in computer vision and robotics. Recognition and prediction of observed human…

计算机视觉与模式识别 · 计算机科学 2021-10-27 Gamze Akyol , Sanem Sariel , Eren Erdal Aksoy

Deep learning approaches may help radiologists in the early diagnosis and timely treatment of cerebrovascular diseases. Accurate cerebral vessel segmentation of Time-of-Flight Magnetic Resonance Angiographs (TOF-MRAs) is an essential step…

图像与视频处理 · 电气工程与系统科学 2021-01-25 V. de Vos , K. M. Timmins , I. C. van der Schaaf , Y. Ruigrok , B. K. Velthuis , H. J. Kuijf

We recently published a deep learning study on the potential of encoder-decoder networks for the segmentation of the 2D CAMUS ultrasound dataset. We propose in this abstract an extension of the evaluation criteria to anatomical assessment,…

This study introduces a new method of visualizing complex tree structured objects. The usefulness of this method is illustrated in the context of detecting unexpected features in a data set of very large trees. The major contribution is a…

应用统计 · 统计学 2012-02-14 Burcu Aydin , Gabor Pataki , Haonan Wang , Alim Ladha , Elizabeth Bullitt , J. S. Marron

Pathological alterations in the human vascular system underlie many chronic diseases, such as atherosclerosis and aneurysms. However, manually analyzing diagnostic images of the vascular system, such as computed tomographic angiograms…

图像与视频处理 · 电气工程与系统科学 2023-11-29 Alireza Bagheri Rajeoni , Breanna Pederson , Ali Firooz , Hamed Abdollahi , Andrew K. Smith , Daniel G. Clair , Susan M. Lessner , Homayoun Valafar

The idea of using a deep autoencoder to encode seismic waveform features and then use them in different seismological applications is appealing. In this paper, we designed tests to evaluate this idea of using autoencoders as feature…

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