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Medical Image Analysis is currently experiencing a paradigm shift due to Deep Learning. This technology has recently attracted so much interest of the Medical Imaging community that it led to a specialized conference in `Medical Imaging…

计算机视觉与模式识别 · 计算机科学 2019-02-18 Fouzia Altaf , Syed M. S. Islam , Naveed Akhtar , Naeem K. Janjua

Deep neural networks trained to predict neural activity from visual input and behaviour have shown great potential to serve as digital twins of the visual cortex. Per-neuron embeddings derived from these models could potentially be used to…

Disease progression modeling aims to characterize and predict how a patient's disease complications worsen over time based on longitudinal electronic health records (EHRs). For diseases such as type 2 diabetes, accurate progression modeling…

人工智能 · 计算机科学 2026-03-31 Tingsong Xiao , Yao An Lee , Zelin Xu , Yupu Zhang , Zibo Liu , Yu Huang , Jiang Bian , Jingchuan Guo , Zhe Jiang

Clinical researchers use disease progression models to understand patient status and characterize progression patterns from longitudinal health records. One approach for disease progression modeling is to describe patient status using a…

Deep neural two-sample tests have recently shown strong power for detecting distributional differences between groups, yet their black-box nature limits interpretability and practical adoption in biomedical analysis. Moreover, most existing…

计算机视觉与模式识别 · 计算机科学 2026-02-06 Masoumeh Javanbakhat , Piotr Komorowski , Dilyara Bareeva , Wei-Chang Lai , Wojciech Samek , Christoph Lippert

Recent advancements in deep learning have brought significant improvements to plant disease recognition. However, achieving satisfactory performance often requires high-quality training datasets, which are challenging and expensive to…

计算机视觉与模式识别 · 计算机科学 2023-12-14 Mingle Xu , Hyongsuk Kim , Jucheng Yang , Alvaro Fuentes , Yao Meng , Sook Yoon , Taehyun Kim , Dong Sun Park

We propose a novel deep learning architecture suitable for the prediction of investor interest for a given asset in a given time frame. This architecture performs both investor clustering and modelling at the same time. We first verify its…

机器学习 · 计算机科学 2021-03-01 Baptiste Barreau , Laurent Carlier , Damien Challet

This paper explores interpretability techniques for two of the most successful learning algorithms in medical decision-making literature: deep neural networks and random forests. We applied these algorithms in a real-world medical dataset…

机器学习 · 计算机科学 2020-02-24 Catarina Moreira , Renuka Sindhgatta , Chun Ouyang , Peter Bruza , Andreas Wichert

This paper presents a method for building patient-based networks that we call Precision disease networks, and its uses for predicting medical outcomes. Our methodology consists of building networks, one for each patient or case, that…

定量方法 · 定量生物学 2019-11-01 J. Cabrera , D. Amaratunga , W. Kostis , J Kostis

DRDr II is a hybrid of machine learning and deep learning worlds. It builds on the successes of its antecedent, namely, DRDr, that was trained to detect, locate, and create segmentation masks for two types of lesions (exudates and…

图像与视频处理 · 电气工程与系统科学 2020-12-01 Farzan Shenavarmasouleh , Farid Ghareh Mohammadi , M. Hadi Amini , Hamid R. Arabnia

In visual object classification, humans often justify their choices by comparing objects to prototypical examples within that class. We may therefore increase the interpretability of deep learning models by imbuing them with a similar style…

计算机视觉与模式识别 · 计算机科学 2023-10-26 Ayodeji Ijishakin , Ahmed Abdulaal , Adamos Hadjivasiliou , Sophie Martin , James Cole

Modeling the time-series of high-dimensional, longitudinal data is important for predicting patient disease progression. However, existing neural network based approaches that learn representations of patient state, while very flexible, are…

机器学习 · 计算机科学 2021-06-21 Zeshan Hussain , Rahul G. Krishnan , David Sontag

Deep Models, typically Deep neural networks, have millions of parameters, analyze medical data accurately, yet in a time-consuming method. However, energy cost effectiveness and computational efficiency are important for prerequisites…

计算机视觉与模式识别 · 计算机科学 2019-02-15 Sijia Chen , Bin Song , Xiaojiang Du , Nadra Guizani

More and more diseases have been found to be strongly correlated with disturbances in the microbiome constitution, e.g., obesity, diabetes, or some cancer types. Thanks to modern high-throughput omics technologies, it becomes possible to…

定量方法 · 定量生物学 2021-04-06 Kateryna Melnyk , Stefan Klus , Grégoire Montavon , Tim Conrad

Deep brain stimulation (DBS) is an established method for treating pathological conditions such as Parkinson's disease, dystonia, Tourette syndrome, and essential tremor. While the precise mechanisms which underly the effectiveness of DBS…

动力系统 · 数学 2020-07-07 Daniel Kuelbs , Jacob Dunefsky , Bharat Monga , Jeff Moehlis

Many complex systems in the real world can be characterized by attributed networks. To mine the potential information in these networks, deep embedded clustering, which obtains node representations and clusters simultaneously, has been paid…

机器学习 · 计算机科学 2022-05-31 Yimei Zheng , Caiyan Jia , Jian Yu , Xuanya Li

Urban living in modern large cities has significant adverse effects on health, increasing the risk of several chronic diseases. We focus on the two leading clusters of chronic disease, heart disease and diabetes, and develop data-driven…

机器学习 · 计算机科学 2018-01-08 Theodora S. Brisimi , Tingting Xu , Taiyao Wang , Wuyang Dai , William G. Adams , Ioannis Ch. Paschalidis

The UK Biobank dataset follows over 500,000 volunteers and contains a diverse set of information related to societal outcomes. Among this vast collection, a large quantity of telemetry collected from wrist-worn accelerometers provides a…

应用统计 · 统计学 2020-11-18 Nikola Pocuca , Mark Farrell , Paul D. McNicholas

There is an increasing interest in the use of Deep Learning (DL) based methods as a supporting analytical framework in oncology. However, most direct applications of DL will deliver models with limited transparency and explainability, which…

定量方法 · 定量生物学 2023-01-26 Magdalena Wysocka , Oskar Wysocki , Marie Zufferey , Dónal Landers , André Freitas

We present a novel coupled two-way clustering approach to gene microarray data analysis. The main idea is to identify subsets of the genes and samples, such that when one of these is used to cluster the other, stable and significant…

生物物理 · 物理学 2009-11-06 G. Getz , E. Levine , E. Domany