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DNA-functionalized particles have great potential for the design of complex self-assembled materials. The major hurdle in realizing crystal structures from DNA-functionalized particles is expected to be kinetic barriers that trap the system…

软凝聚态物质 · 物理学 2015-03-06 Yajun Ding , Jeetain Mittal

We study the properties of heavy quarks as probes of strongly coupled plasmas with and without chemical potential by means of the gauge/gravity (AdS/CFT) duality. We compute the screening distance of a heavy quark-antiquark pair, its free…

高能物理 - 理论 · 物理学 2015-11-13 Carlo Ewerz , Ling Lin , Andreas Samberg , Konrad Schade

We review two different theoretical approaches to the strong interaction dynamics at the early times immediately following heavy ion collisions. One approach is based on small-coupling physics of the Color Glass Condensate (CGC). The other…

高能物理 - 唯象学 · 物理学 2009-11-18 Yuri V. Kovchegov

We discuss in detail properties of trapped atomic condensates with anisotropic dipole interactions. A practical procedure for constructing anisotropic low energy pseudo potentials is proposed and justified by the agreement with results of…

凝聚态物理 · 物理学 2009-10-31 S. Yi , L. You

We provide a methodology for generating interatomic potentials for use in classical molecular dynamics simulations of atomistic phenomena occurring at energy scales ranging from lattice vibrations to crystal defects to high energy…

材料科学 · 物理学 2009-12-03 Pratyush Tiwary , Axel van de Walle , Niels Grønbech-Jensen

Data-driven schemes that associate molecular and crystal structures with their microscopic properties share the need for a concise, effective description of the arrangement of their atomic constituents. Many types of models rely on…

机器学习 · 统计学 2022-06-08 Jigyasa Nigam , Sergey Pozdnyakov , Guillaume Fraux , Michele Ceriotti

Frequency modulation (FM) Atomic Force Microscopy (AFM) with metal tips functionalized with a CO molecule at the tip apex has provided access to the internal structure of molecules with totally unprecedented resolution. We propose a model…

材料科学 · 物理学 2022-05-03 Jaime Carracedo-Cosme , Rubén Pérez

Experiments with cold ion-atom mixtures have recently opened the way for the production and application of ultracold molecular ions. Here, in a comparative study, we theoretically investigate ground and several excited electronic states and…

原子物理 · 物理学 2020-08-12 Wissem Zrafi , Hela Ladjimi , Halima Said , Hamid Berriche , Michał Tomza

The structural relaxation of amorphous materials is described as arising from the superposition of elementary processes with varying activation energies. We show that it is possible to obtain the kinetic parameters of these processes from…

材料科学 · 物理学 2009-01-19 Pere Roura , Jordi Farjas

Crystal structure prediction is a long-standing challenge in materials science, with most data-driven methods developed for inorganic systems. This leaves an important gap for organic crystals, which are central to pharmaceuticals,…

材料科学 · 物理学 2026-02-25 Mohammadmahdi Vahediahmar , Matthew A. McDonald , Feng Liu

We model Lagrangian lateral mixing and transport of passive scalars in meandering oceanic jet currents by two-dimensional advection equations with a kinematic stream function with a time-dependent amplitude of a meander imposed. The…

混沌动力学 · 物理学 2012-02-03 M. V. Budyansky , S. V. Prants

We implemented a coarse-graining procedure to construct mesoscopic models of complex molecules. The final aim is to obtain better results on properties depending on slow modes of the molecules. Therefore the number of particles considered…

软凝聚态物质 · 物理学 2009-10-31 Hendrik Meyer , Oliver Biermann , Roland Faller , Dirk Reith , Florian Mueller-Plathe

Accurate modelling of electrostatic interactions and charge transfer is fundamental to computational chemistry, yet most machine learning interatomic potentials (MLIPs) rely on local atomic descriptors that cannot capture long-range…

We study the structural and mechanical properties of nanoporous (NP) carbon materials by extensive atomistic machine-learning (ML) driven molecular dynamics (MD) simulations. To this end, we retrain a ML Gaussian approximation potential…

材料科学 · 物理学 2021-12-14 Yanzhou Wang , Zheyong Fan , Ping Qian , Tapio Ala-Nissila , Miguel A. Caro

We proved earlier that in the strained monoatomic chains with Lennard-Jones potential there can exist an equilibrium static bi-structure, which corresponds to N - 1 equal short interatomic bonds and one long bond with inversion in its…

斑图形成与孤子 · 物理学 2019-03-14 George Chechin , Victoria Lapina

We study quasi-freestanding bilayer graphene on silicon carbide intercalated by calcium. The intercalation, and subsequent changes to the system, were investigated by low-energy electron diffraction, angle-resolved photoemission…

Microscopic models of the interaction between grain boundaries (GBs) and both dislocations and cracks are of importance in understanding the role of microstructure in altering the mechanical properties of a material. A recently developed…

材料科学 · 物理学 2009-10-30 V. B. Shenoy , R. Miller , E. B. Tadmor , R. Phillips , M. Ortiz

Despite the fundamental importance of solid-solid transformations in many technologies, the microscopic mechanisms remain poorly understood. Here, we explore the atomistic mechanisms at the migrating interface during solid-solid phase…

材料科学 · 物理学 2023-10-31 Yanyan Liang , Grisell Díaz Leines , Ralf Drautz , Jutta Rogal

Studying the conformations involved in the dimerization of cadherins is highly relevant to understand the development of tissue and its failure, which is associated with tumors and metastases. Experimental techniques, like X-ray…

生物大分子 · 定量生物学 2020-02-26 S. Terzoli , G. Tiana

The molecular dynamics method is applied to simulate the recrystallization of an amorphous/crystalline silicon interface. The atomic structure of the amorphous material is constructed with the method of Wooten, Winer, and Weaire. The…

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