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In this paper we consider large state space continuous time Markov chains (MCs) arising in the field of systems biology. For density dependent families of MCs that represent the interaction of large groups of identical objects, Kurtz has…

Many machine learning models, including those with non-smooth regularizers, can be formulated as consensus optimization problems, which can be solved by the alternating direction method of multipliers (ADMM). Many recent efforts have been…

机器学习 · 计算机科学 2018-02-27 Rui Zhu , Di Niu , Zongpeng Li

At the scale of the individual cell, protein production is a stochastic process with multiple time scales, combining quick and slow random steps with discontinuous and smooth variation. Hybrid stochastic processes, in particular…

分子网络 · 定量生物学 2019-05-02 Guilherme C. P. Innocentini , Fernando Antoneli , Arran Hodgkinson , Ovidiu Radulescu

Atomistic simulations provide valuable insights into the physical processes governing material behavior. However, their applicability is fundamentally constrained by the limited time scales accessible to brute-force simulations. This…

计算物理 · 物理学 2026-02-16 Michael Kim , Wei Cai

When solving consensus optimization problems over a graph, there is often an explicit characterization of the convergence rate of Gradient Descent (GD) using the spectrum of the graph Laplacian. The same type of problems under the…

机器学习 · 统计学 2017-10-04 Guilherme França , José Bento

In this paper, we propose a novel distributed alternating direction method of multipliers (ADMM) algorithm with synergetic communication and computation, called SCCD-ADMM, to reduce the total communication and computation cost of the…

信号处理 · 电气工程与系统科学 2020-09-30 Zhuojun Tian , Zhaoyang Zhang , Jue Wang , Xiaoming Chen , Wei Wang , Huaiyu Dai

The alternating direction method of multipliers (ADMM) is commonly used for distributed model fitting problems, but its performance and reliability depend strongly on user-defined penalty parameters. We study distributed ADMM methods that…

机器学习 · 计算机科学 2017-06-21 Zheng Xu , Gavin Taylor , Hao Li , Mario Figueiredo , Xiaoming Yuan , Tom Goldstein

Stochastic kinetic models (SKMs) are increasingly used to account for the inherent stochasticity exhibited by interacting populations of species in areas such as epidemiology, population ecology and systems biology. Species numbers are…

统计计算 · 统计学 2023-04-06 Tom E. Lowe , Andrew Golightly , Chris Sherlock

This paper considers the problem of distributed model fitting using the alternating directions method of multipliers (ADMM). ADMM splits the learning problem into several smaller subproblems, usually by partitioning the data samples. The…

最优化与控制 · 数学 2022-03-04 Dinesh Krishnamoorthy , Vyacheslav Kungurtsev

We present an efficient alternating direction method of multipliers (ADMM) algorithm for segmenting a multivariate non-stationary time series with structural breaks into stationary regions. We draw from recent work where the series is…

机器学习 · 统计学 2018-06-26 Alex Tank , Emily B. Fox , Ali Shojaie

Aiming at solving large-scale learning problems, this paper studies distributed optimization methods based on the alternating direction method of multipliers (ADMM). By formulating the learning problem as a consensus problem, the ADMM can…

分布式、并行与集群计算 · 计算机科学 2016-05-04 Tsung-Hui Chang , Mingyi Hong , Wei-Cheng Liao , Xiangfeng Wang

We propose a distributed algorithm based on Alternating Direction Method of Multipliers (ADMM) to minimize the sum of locally known convex functions using communication over a network. This optimization problem emerges in many applications…

最优化与控制 · 数学 2016-01-05 Ali Makhdoumi , Asuman Ozdaglar

Tensor factorization with hard and/or soft constraints has played an important role in signal processing and data analysis. However, existing algorithms for constrained tensor factorization have two drawbacks: (i) they require…

数值分析 · 数学 2024-07-01 Shunsuke Ono , Takuma Kasai

We propose a general algorithmic framework for constrained matrix and tensor factorization, which is widely used in signal processing and machine learning. The new framework is a hybrid between alternating optimization (AO) and the…

机器学习 · 统计学 2016-08-24 Kejun Huang , Nicholas D. Sidiropoulos , Athanasios P. Liavas

The discrete class algorithm presented in this paper is an efficient simulation tool for stochastic processes governed by a reasonably small set of transition rates. The algorithm is presented, its performance compared to prevailing methods…

计算物理 · 物理学 2008-02-03 Hans E. Plesser , Dietmar Wendt

We introduce an algorithm for generating a random sequence of fragmentation trees, which we call the ancestral branching algorithm. This algorithm builds on the recursive partitioning structure of a tree and gives rise to an associated…

概率论 · 数学 2011-11-02 Harry Crane

While transformer models have been highly successful, they are computationally inefficient. We observe that for each layer, the full width of the layer may be needed only for a small subset of tokens inside a batch and that the "effective"…

机器学习 · 计算机科学 2024-12-19 Bartosz Wójcik , Alessio Devoto , Karol Pustelnik , Pasquale Minervini , Simone Scardapane

The Alternating Direction Method of Multipliers (ADMM) has gained a lot of attention for solving large-scale and objective-separable constrained optimization. However, the two-block variable structure of the ADMM still limits the practical…

最优化与控制 · 数学 2020-03-24 Kresimir Mihic , Mingxi Zhu , Yinyu Ye

We propose a novel data-driven method to accelerate the convergence of Alternating Direction Method of Multipliers (ADMM) for solving distributed DC optimal power flow (DC-OPF) where lines are shared between independent network partitions.…

最优化与控制 · 数学 2020-09-16 David Biagioni , Peter Graf , Xiangyu Zhang , Ahmed Zamzam , Kyri Baker , Jennifer King

An event sequence generated by a temporal point process is often associated with a hidden and structured event branching process that captures the triggering relations between its historical and current events. In this study, we design a…

机器学习 · 计算机科学 2025-01-09 Qingmei Wang , Yuxin Wu , Yujie Long , Jing Huang , Fengyuan Ran , Bing Su , Hongteng Xu