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BEF studies aim to understand how ecosystems respond to a gradient of species diversity. Diversity-Interactions (DI) models are suitable for analysing the BEF relationship. These models relate an ecosystem function response of a community…

Understanding the behaviors of ecological systems is challenging given their multi-faceted complexity. To proceed, theoretical models such as Lotka-Volterra dynamics with random interactions have been investigated by the dynamical…

生物物理 · 物理学 2024-11-13 Jong Il Park , Deok-Sun Lee , Sang Hoon Lee , Hye Jin Park

Ecosystems are formed by networks of species and their interactions. Traditional models of such interactions assume a constant interaction strength between a given pair of species. However, there is often significant trait variation among…

种群与进化 · 定量生物学 2022-05-03 Zachary Jackson , BingKan Xue

Disordered systems theory provides powerful tools to analyze the generic behaviors of highdimensional systems, such as species-rich ecological communities or neural networks. By assuming randomness in their interactions, universality…

种群与进化 · 定量生物学 2025-03-20 Juan Giral Martínez

Complementarity among species with different traits is one of the basic processes affecting biodiversity, defined as the number of species in the ecosystem. We present here a soluble model ecosystem in which the species are characterized by…

无序系统与神经网络 · 物理学 2009-11-07 Viviane M. de Oliveira , J. F. Fontanari

The behavior of ecological systems mainly relies on the interactions between the species it involves. We consider the problem of inferring the species interaction network from abundance data. To be relevant, any network inference…

应用统计 · 统计学 2019-10-29 Raphaëlle Momal , Stéphane Robin , Christophe Ambroise

Mutualistic interactions, where individuals from different species can benefit from each other, are widespread across ecosystems. This study develops a general deterministic model of mutualism involving two populations, assuming that…

种群与进化 · 定量生物学 2026-02-26 Chloë Mian , Sylvain Billiard , Violaine Llaurens , Charline Smadi

Relations among species in ecosystems can be represented by complex networks where both negative (competition) and positive (mutualism) interactions are concurrently present. Recently, it has been shown that many ecosystems can be cast into…

物理与社会 · 物理学 2017-03-20 Carlos Gracia-Lázaro , Laura Hernández , Javier Borge-Holthoefer , Yamir Moreno

Many organisms live in populations structured by space and by class, exhibit plastic responses to their social partners, and are subject to non-additive ecological and fitness effects. Social evolution theory has long recognized that all of…

种群与进化 · 定量生物学 2014-04-24 Jeremy Van Cleve , Erol Akçay

While including pairwise interactions in a regression model can better approximate response surface, fitting such an interaction model is a well-known difficult problem. In particular, analyzing contemporary high-dimensional datasets often…

统计方法学 · 统计学 2024-01-17 Hai Lu , Guo Yu

We study a model ecosystem by means of dynamical techniques from disordered systems theory. The model describes a set of species subject to competitive interactions through a background of resources, which they feed upon. Additionally…

种群与进化 · 定量生物学 2009-11-13 Yoshimi Yoshino , Tobias Galla , Kei Tokita

Mutualistic interactions, which are beneficial for both interacting species, are recurrently present in ecosystems. Observations of natural systems showed that, if we draw mutualistic relationships as binary links between species, the…

物理与社会 · 物理学 2019-08-21 Clàudia Payrató Borrás , Laura Hernández , Yamir Moreno

In the analysis of complex ecosystems it is common to use random interaction coefficients, often assumed to be such that all species are statistically equivalent. In this work we relax this assumption by choosing interactions according to…

种群与进化 · 定量生物学 2023-03-08 Lyle Poley , Joseph W. Baron , Tobias Galla

How diversity is maintained in natural ecosystems is a long-standing question in Theoretical Ecology. By studying a system that combines ecological dynamics, heterogeneous interactions and spatial structure, we uncover a new mechanism for…

种群与进化 · 定量生物学 2024-03-21 Giulia Garcia Lorenzana , Ada Altieri , Giulio Biroli

Multi-agent systems in biology, society, and engineering are capable of making decisions through the dynamic interaction of their elements. Nonlinearity of the interactions is key for the speed, robustness, and flexibility of multi-agent…

The persistence of biodiversity of species is a challenging proposition in ecological communities in the face of Darwinian selection. The present article investigates beyond the pairwise competitive interactions and provides a novel…

种群与进化 · 定量生物学 2022-11-09 Sourin Chatterjee , Sayantan Nag Chowdhury , Dibakar Ghosh , Chittaranjan Hens

We consider a multi-species community modelled as a complex network of populations, where the links are given by a random asymmetric matrix J, with fraction 1-C of zero entries, where C reflects the over-all connectivity of the system. The…

生物物理 · 物理学 2015-12-31 Anshul Choudhary , Sudeshna Sinha

An important problem in the field of bioinformatics is to identify interactive effects among profiled variables for outcome prediction. In this paper, a logistic regression model with pairwise interactions among a set of binary covariates…

人工智能 · 计算机科学 2016-12-30 Easton Li Xu , Xiaoning Qian , Tie Liu , Shuguang Cui

Does an ecological community allow stable coexistence? Identifying the general principles that determine the answer to this question is a central problem of theoretical ecology. Random matrix theory approaches have uncovered the general…

种群与进化 · 定量生物学 2025-12-12 Yu Meng , Szabolcs Horvát , Carl D. Modes , Pierre A. Haas

We introduce an Interaction and Trade-off based Eco-Evolutionary Model (ITEEM), in which species are competing for common resources in a well-mixed system, and their evolution in interaction trait space is subject to a life-history…

种群与进化 · 定量生物学 2018-09-07 Farnoush Farahpour , Mohammadkarim Saeedghalati , Verena Brauer , Daniel Hoffmann
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