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Transport of molecules across membrane channels is investigated theoretically using exactly solvable discrete stochastic site-binding models. It is shown that the interaction potential between molecules and the channel has a strong effect…

软凝聚态物质 · 物理学 2009-11-11 Anatoly B. Kolomeisky

The self-organization of proteins into enriched compartments and the formation of complex patterns are crucial processes for life on the cellular level. Liquid-liquid phase separation is one mechanism for forming such enriched compartments.…

软凝聚态物质 · 物理学 2025-04-07 Antonia Winter , Yuhao Liu , Alexander Ziepke , George Dadunashvili , Erwin Frey

Tracer-diffusion of small molecules through dense systems of chain polymers is studied within an athermal lattice model, where hard core interactions are taken into account by means of the site exclusion principle. An approximate mapping of…

软凝聚态物质 · 物理学 2009-11-07 O. Durr , T. Volz , W. Dieterich , A. Nitzan

Biomolecular condensates are essential for cellular organization and result from phase separation in systems far from thermodynamic equilibrium. Among various models, chemically active droplets play a significant role, consisting of…

软凝聚态物质 · 物理学 2025-05-19 Jacques Fries , Roxanne Berthin , Chengjie Luo , Marie Jardat , David Zwicker , Vincent Dahirel , Pierre Illien

We employ a multiscale approach to model the translocation of biopolymers through nanometer size pores. Our computational scheme combines microscopic Langevin molecular dynamics (MD) with a mesoscopic lattice Boltzmann (LB) method for the…

生物物理 · 物理学 2011-11-10 Maria Fyta , Simone Melchionna , Efthimios Kaxiras , Sauro Succi

Vitrimers are polymer networks that can undergo bond exchange reactions. They dynamically rearrange their structures while maintaining their overall integrity, thus resulting in unique properties such as self-healing, reprocessability,…

软凝聚态物质 · 物理学 2024-02-27 Rahul Karmakar , Himanshu , Srikanth Sastry , Sanat K Kumar , Tarak K Patra

Vitrimers are a class of crosslinked polymer that are capable of undergoing bond exchange reactions, allowing structural reorganization while maintaining overall network integrity. Two key features that are particularly relevant when this…

软凝聚态物质 · 物理学 2025-09-09 Abhishek S. Chankapure , Rahul Karmakar , Srikanth Sastry , Sanat K. Kumar , Tarak K. Patra

We investigate the static and dynamic properties of dendrimers diffusing through a network of linear associative polymers using coarse-grained Brownian dynamics simulations. Both dendrimers and network chains are modelled as bead-spring…

软凝聚态物质 · 物理学 2025-11-26 Silpa Mariya , Jeremy J. Barr , P. Sunthar , J. Ravi Prakash

State-of-the-art techniques for simulating deeply supercooled liquids require a high degree of size polydispersity to be effective. While these techniques have enabled great insight into the microscopic dynamics near the glass transition,…

软凝聚态物质 · 物理学 2023-08-10 Ilian Pihlajamaa , Corentin C. L. Laudicina , Liesbeth M. C. Janssen

We investigate the spatial and temporal features of dense contaminant plumes dynamics in porous materials. Our analysis is supported by novel experimental results concerning pollutant concentration profiles inside a vertical column setup.…

流体动力学 · 物理学 2009-09-29 Andrea Zoia , Christelle Latrille , Alberto Beccantini , Alain Cartalade

Describing the diffusion of particles through crowded, confined environments with which they can interact is of considerable biological and technological interest. Under conditions where the confinement dimensions become comparable to the…

软凝聚态物质 · 物理学 2009-11-13 Mark L. Henle , Brian DiDonna , Christian D. Santangelo , Ajay Gopinathan

We study the structure and dynamics of a transient network composed of droplets of microemulsion connected by telechelic polymers. The polymer induces a bridging attraction between droplets without changing their shape. A viscoelastic…

软凝聚态物质 · 物理学 2009-10-31 F. Molino , J. Appell , M. Filali , E. Michel , G. Porte , S. Mora , E. Sunyer

While recent efforts have shown how local structure plays an essential role in the dynamic heterogeneity of homogeneous glass-forming materials, systems containing interfaces such as thin films or composite materials remain poorly…

软凝聚态物质 · 物理学 2022-04-27 Entao Yang , James F. Pressly , Bharath Natarajan , Robert Colby , Karen I. Winey , Robert A. Riggleman

When moist air meets a cold surface, it creates a breath figure characterized by numerous small droplets. The central question is how the vapor flux is distributed between the growth of previously condensed drops and the nucleation of new…

流体动力学 · 物理学 2025-08-27 Ambre Bouillant , Christopher Henkel , Uwe Thiele , Bruno Andreotti , Jacco H. Snoeijer

The understanding of dynamics and functioning of biological membranes and in particular of membrane embedded proteins is one of the most fundamental problems and challenges in modern biology and biophysics. In particular the impact of…

生物物理 · 物理学 2009-12-27 Maikel C. Rheinstadter

The formation of (bio)molecular condensates via liquid-liquid phase separation in cells has received increasing attention, as these coacervates play important functional and regulatory roles within biological systems. However, the majority…

软凝聚态物质 · 物理学 2022-11-24 Arash Nikoubashman , Miho Yanagisawa

While the dynamics of polymer chains in equilibrium media is well understood by now, the polymer dynamics in active non-equilibrium environments can be very different. Here we study the dynamics of polymers in a viscous medium containing…

软凝聚态物质 · 物理学 2017-06-23 Jaeoh Shin , Andrey G. Cherstvy , Won Kyu Kim , Vasily Zaburdaev

Flowing granular materials segregate due to differences in particle size (driven by percolation) and density (driven by buoyancy). Modelling the segregation of mixtures of large/heavy particles and small/light particles is challenging due…

软凝聚态物质 · 物理学 2021-05-18 Yifei Duan , Paul B. Umbanhowar , Julio M. Ottino , Richard M. Lueptow

Using molecular dynamics simulation, we investigate the effect of confinement on a system that comprises several stiff segmented polymer chains where each chain has similar segments, but length and stiffness of the segments vary among the…

软凝聚态物质 · 物理学 2015-07-14 Arash Azari , Kristian K. Müller-Nedebock

Thermal conduction in polymer nanocomposites depends on several parameters including the thermal conductivity and geometrical features of the nanoparticles, the particle loading, their degree of dispersion and formation of a percolating…

应用物理 · 物理学 2021-01-25 Alessandro di Pierro , Alberto Fina