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相关论文: Activity-driven tissue alignment in proliferating …

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A three-dimensional cell culture called a spheroid serves as a foundational entity in a wide variety of modern tissue engineering applications, including 3D-bioprinting and preclinical drug testing. Lack of oxygen within tissue spheroids…

计算物理 · 物理学 2025-02-05 Katherine Vilinski-Mazur , Bogdan Kirillov , Oleg Rogozin , Dmitry Kolomenskiy

Cells are dynamic systems characterized by temporal variations in biophysical properties such as stiffness and contractility. Recent studies show that the recruitment and release of actin filaments into and out of the cell cortex - a…

生物物理 · 物理学 2023-02-13 Garrett Zills , Trinanjan Datta , Abdul N Malmi-Kakkada

Understanding how cells escape from embedded spheroids requires a mechanical framework linking stress generation within cells, across cells, and between cells and the surrounding extracellular matrix (ECM). We develop such a framework by…

Cell monolayers are a central model system to tissue biophysics. In vivo, epithelial tissues are curved on the scale of microns, and curvature's role in the onset of spontaneous tissue flows is still not well-understood. Here, we present a…

生物物理 · 物理学 2022-09-21 Samuel Bell , Shao-Zhen Lin , Jean-François Rupprecht , Jacques Prost

In invasive breast cancer, cell clusters of varying sizes and shapes are embedded in the fibrous extracellular matrix (ECM). Although the prevailing view attributes this structure to increasing disorder resulting from loss of function and…

It is known that mechanical interactions couple a cell to its neighbors, enabling a feedback loop to regulate tissue growth. However, the interplay between cell-cell adhesion strength, local cell density and force fluctuations in regulating…

软凝聚态物质 · 物理学 2020-02-12 Abdul Malmi-Kakkada , Xin Li , Sumit Sinha , D. Thirumalai

It is widely recognized that reciprocal interactions between cells and their microenvironment, via mechanical forces and biochemical signaling pathways, regulate cell behaviors during normal development, homeostasis and disease progression…

生物物理 · 物理学 2024-12-05 Nonthakorn Olaranont , Chaozhen Wei , John Lowengrub , Min Wu

We numerically investigate how spatial variations of extensile or contractile active stress affect bulk active nematic systems in two and three dimensions. In the absence of defects, activity gradients drive flows which re-orient the…

软凝聚态物质 · 物理学 2022-06-15 Liam J Ruske , Julia M Yeomans

Biological cells can actively tune their intracellular architecture according to their overall shape. Here we explore the rheological implication of such coupling in a minimal model of a dense cellular material where each cell exerts an…

软凝聚态物质 · 物理学 2022-04-13 Shao-Zhen Lin , Matthias Merkel , Jean-François Rupprecht

We investigate morphologies of proliferating cellular tissue using a newly developed numerical simulation model for mechanical cell division. The model reproduces structures of simple multi-cellular organisms via simple rules for selective…

软凝聚态物质 · 物理学 2018-11-20 Pranav Madhikar , Jan Åström , Björn Baumeier , Mikko Karttunen

A variety of living and non-living systems exhibit collective motion. From swarm robotics to bacterial swarms, and tissue wound healing to human crowds, examples of collective motion are highly diverse but all of them share the common…

生物物理 · 物理学 2023-07-12 Jonathan E. Dawson , Abdul N. Malmi-Kakkada

We use a theoretical approach to examine the effect of a radial fluid flow or electric current on the growth and homeostasis of a cell spheroid. Such conditions may be generated by a drain of micrometric diameter. To perform this analysis,…

生物物理 · 物理学 2021-05-27 Charlie Duclut , Jacques Prost , Frank Jülicher

We investigate the dynamics of spheroids immersed in the journal bearing flow subject to a contractible non-reciprocal loop. We show how geometric phases appear not only in the position, but also in the orientation of such particles. We…

流体动力学 · 物理学 2021-04-13 Jorge Arrieta , Julyan H. E Cartwright , Oreste Piro , Idan Tuval

Most organisms grow according to simple laws, which in principle can be derived from energy conservation and scaling arguments, critically dependent on the relation between the metabolic rate B of energy flow and the organism mass m.…

Topological defects, which are singular points in a director field, play a major role in shaping active systems. Here, we experimentally study topological defects and the flow patterns around them, that are formed during the highly rapid…

软凝聚态物质 · 物理学 2024-03-20 Victor Yashunsky , Daniel J. G. Pearce , Gil Ariel , Avraham Be'er

Recent advancements in the ability to construct three-dimensional (3D) tissues and organoids from stem cells and biomaterials have not only opened abundant new research avenues in disease modeling and regenerative medicine but also have…

组织与器官 · 定量生物学 2017-07-27 Richard J. McMurtrey

Tissue self-organization into defined and well-controlled three-dimensional structures is essential during development for the generation of organs. A similar, but highly deranged process might also occur during the aberrant growth of…

细胞行为 · 定量生物学 2019-05-21 Abramo Agosti , Stefano Marchesi , Giorgio Scita , Pasquale Ciarletta

Cell alignment often forms nematic order, which can lead to anomalous collective cell flow due to the so-called active force. Although it is appreciated that cell migration is driven by traction force, a quantitative evaluation of the…

软凝聚态物质 · 物理学 2024-02-27 Masahito Uwamichi , He Li , Zihui Zhao , Yisong Yao , Hideo Higuchi , Kyogo Kawaguchi , Masaki Sano

In these Lecture Notes we aim at clarifying how soft matter physics, and herein notably statistical mechanics and fluid mechanics, can be engaged to understand and manipulate non-equilibrium systems consisting of numerous (microscopic)…

软凝聚态物质 · 物理学 2025-05-27 Jean-François Joanny , Joseph O. Indekeu

Although tissues are usually studied in isolation, this situation rarely occurs in biology, as cells, tissues, and organs, coexist and interact across scales to determine both shape and function. Here, we take a quantitative approach…

组织与器官 · 定量生物学 2023-02-07 Carles Falcó , Daniel J. Cohen , José A. Carrillo , Ruth E. Baker