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Recently developed deep learning techniques have significantly improved the accuracy of various speech and image recognition systems. In this paper we adapt some of these techniques for protein secondary structure prediction. We first train…

机器学习 · 计算机科学 2016-11-07 Akosua Busia , Jasmine Collins , Navdeep Jaitly

A deep neural network based architecture was constructed to predict amino acid side chain conformation with unprecedented accuracy. Amino acid side chain conformation prediction is essential for protein homology modeling and protein design.…

生物大分子 · 定量生物学 2017-07-27 Ke Liu , Xiangyan Sun , Jun Ma , Zhenyu Zhou , Qilin Dong , Shengwen Peng , Junqiu Wu , Suocheng Tan , Günter Blobel , Jie Fan

In the last several years the use of neural networks as tools to automate species classification from digital data has increased. This has been due in part to the high classification accuracy of image classification through Convolutional…

声音 · 计算机科学 2025-09-16 Sergio Poo Hernandez , Vadim Bulitko , Erin Bayne

We propose a novel deep neural network architecture for speech recognition that explicitly employs knowledge of the background environmental noise within a deep neural network acoustic model. A deep neural network is used to predict the…

计算与语言 · 计算机科学 2016-10-03 Suyoun Kim , Bhiksha Raj , Ian Lane

Nuclear magnetic resonance (NMR) spectroscopy provides detailed information pertaining to dynamic processes through line-shape changes, which have been traditionally limited to equilibrium conditions. However, there is a wealth of…

Nuclear Magnetic Resonance (NMR) spectroscopy is a central characterization method for molecular structure elucidation, yet interpreting NMR spectra to deduce molecular structures remains challenging due to the complexity of spectral data…

化学物理 · 物理学 2025-07-15 Qingsong Yang , Binglan Wu , Xuwei Liu , Bo Chen , Wei Li , Gen Long , Xin Chen , Mingjun Xiao

Nuclear Magnetic Resonance (NMR) spectroscopy is a cornerstone technique for determining the structures of small molecules and is especially critical in the discovery of novel natural products and clinical therapeutics. Yet, interpreting…

Small molecules in biological samples are studied to provide information about disease states, environmental toxins, natural product drug discovery, and many other applications. The primary window into the composition of small molecule…

机器学习 · 计算机科学 2023-05-08 Gennady Voronov , Rose Lightheart , Joe Davison , Christoph A. Krettler , David Healey , Thomas Butler

Deep neural networks have shown promise for music audio signal processing applications, often surpassing prior approaches, particularly as end-to-end models in the waveform domain. Yet results to date have tended to be constrained by low…

音频与语音处理 · 电气工程与系统科学 2020-06-11 William Mitchell , Scott H. Hawley

Audio classification is paramount in a variety of applications including surveillance, healthcare monitoring, and environmental analysis. Traditional methods frequently depend on intricate signal processing algorithms and manually crafted…

声音 · 计算机科学 2025-02-24 Amlan Basu , Pranav Chaudhari , Gaetano Di Caterina

Acoustic emotion recognition aims to categorize the affective state of the speaker and is still a difficult task for machine learning models. The difficulties come from the scarcity of training data, general subjectivity in emotion…

计算与语言 · 计算机科学 2018-04-02 Egor Lakomkin , Cornelius Weber , Sven Magg , Stefan Wermter

Achieving atomic resolution is the ultimate limit of magnetic resonance imaging (MRI), and attaining this capability offers enormous technological and scientific opportunities, from drug development to understanding the dynamics in…

Emotion is a complicated notion present in music that is hard to capture even with fine-tuned feature engineering. In this paper, we investigate the utility of state-of-the-art pre-trained deep audio embedding methods to be used in the…

声音 · 计算机科学 2021-04-15 Eunjeong Koh , Shlomo Dubnov

One-dimensional NMR spectroscopy is one of the most widely used techniques for the characterization of organic compounds and natural products. For molecules with up to 36 non-hydrogen atoms, the number of possible structures has been…

We studied the ability of deep neural networks (DNNs) to restore missing audio content based on its context, a process usually referred to as audio inpainting. We focused on gaps in the range of tens of milliseconds. The proposed DNN…

声音 · 计算机科学 2022-02-21 Andrés Marafioti , Nicki Holighaus , Piotr Majdak , Nathanaël Perraudin

Automated bioacoustic analysis aids understanding and protection of both marine and terrestrial animals and their habitats across extensive spatiotemporal scales, and typically involves analyzing vast collections of acoustic data. With the…

音频与语音处理 · 电气工程与系统科学 2023-12-22 Burooj Ghani , Tom Denton , Stefan Kahl , Holger Klinck

In this paper, we propose a method to improve sound classification performance by combining signal features, derived from the time-frequency spectrogram, with human perception. The method presented herein exploits an artificial neural…

计算机视觉与模式识别 · 计算机科学 2013-06-19 Mohammad Pourhomayoun , Peter Dugan , Marian Popescu , Denise Risch , Hal Lewis , Christopher Clark

Distant speech recognition is a challenge, particularly due to the corruption of speech signals by reverberation caused by large distances between the speaker and microphone. In order to cope with a wide range of reverberations in…

计算与语言 · 计算机科学 2016-08-18 Jeehye Lee , Myungin Lee , Joon-Hyuk Chang

This paper compares machine learning approaches with different input data formats for the classification of acoustic emission (AE) signals. AE signals are a promising monitoring technique in many structural health monitoring applications.…

信号处理 · 电气工程与系统科学 2025-01-03 Uditha Muthumala , Yuxuan Zhang , Luciano Sebastian Martinez-Rau , Sebastian Bader

Artificial neural networks (ANN) have become the mainstream acoustic modeling technique for large vocabulary automatic speech recognition (ASR). A conventional ANN features a multi-layer architecture that requires massive amounts of…

神经与进化计算 · 计算机科学 2019-11-20 Jibin Wu , Emre Yilmaz , Malu Zhang , Haizhou Li , Kay Chen Tan