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High-resolution slice-to-volume reconstruction (SVR) from multiple motion-corrupted low-resolution 2D slices constitutes a critical step in image-based diagnostics of moving subjects, such as fetal brain Magnetic Resonance Imaging (MRI).…

Fully convolutional networks have become the backbone of modern medical imaging due to their ability to learn multi-scale representations and perform end-to-end inference. Yet their potential for slice-to-volume reconstruction (SVR), the…

图像与视频处理 · 电气工程与系统科学 2026-01-13 Margherita Firenze , Sean I. Young , Clinton J. Wang , Hyuk Jin Yun , Elfar Adalsteinsson , Kiho Im , P. Ellen Grant , Polina Golland

In magnetic resonance imaging (MRI), slice-to-volume reconstruction (SVR) refers to computational reconstruction of an unknown 3D magnetic resonance volume from stacks of 2D slices corrupted by motion. While promising, current SVR methods…

图像与视频处理 · 电气工程与系统科学 2024-02-29 Sean I. Young , Yaël Balbastre , Bruce Fischl , Polina Golland , Juan Eugenio Iglesias

Functional Magnetic Resonance Imaging (fMRI) is vital in neuroscience, enabling investigations into brain disorders, treatment monitoring, and brain function mapping. However, head motion during fMRI scans, occurring between shots of slice…

计算机视觉与模式识别 · 计算机科学 2024-04-09 Samah Khawaled , Simon K. Warfield , Moti Freiman

This paper aims to solve a fundamental problem in intensity-based 2D/3D registration, which concerns the limited capture range and need for very good initialization of state-of-the-art image registration methods. We propose a regression…

计算机视觉与模式识别 · 计算机科学 2017-03-07 Benjamin Hou , Amir Alansary , Steven McDonagh , Alice Davidson , Mary Rutherford , Jo V. Hajnal , Daniel Rueckert , Ben Glocker , Bernhard Kainz

In in-utero MRI, motion correction for fetal body and placenta poses a particular challenge due to the presence of local non-rigid transformations of organs caused by bending and stretching. The existing slice-to-volume registration (SVR)…

High-quality 3D fetal brain MRI reconstruction from motion-corrupted 2D slices is crucial for clinical diagnosis. Reliable slice-to-volume registration (SVR)-based motion correction and super-resolution reconstruction (SRR) methods are…

图像与视频处理 · 电气工程与系统科学 2025-05-27 Jiangjie Wu , Lixuan Chen , Zhenghao Li , Xin Li , Saban Ozturk , Lihui Wang , Rongpin Wang , Hongjiang Wei , Yuyao Zhang

The automatic classification of 3D medical data is memory-intensive. Also, variations in the number of slices between samples is common. Na\"ive solutions such as subsampling can solve these problems, but at the cost of potentially…

计算机视觉与模式识别 · 计算机科学 2023-07-24 Marzieh Oghbaie , Teresa Araujo , Taha Emre , Ursula Schmidt-Erfurth , Hrvoje Bogunovic

Reconstructing 3D fetal MR volumes from motion-corrupted stacks of 2D slices is a crucial and challenging task. Conventional slice-to-volume reconstruction (SVR) methods are time-consuming and require multiple orthogonal stacks for…

计算机视觉与模式识别 · 计算机科学 2026-04-13 Yinsong Wang , Thomas Fletcher , Xinzhe Luo , Aine Travers Dineen , Rhodri Cusack , Chen Qin

2D to 3D registration is essential in tasks such as diagnosis, surgical navigation, environmental understanding, navigation in robotics, autonomous systems, or augmented reality. In medical imaging, the aim is often to place a 2D image in a…

计算机视觉与模式识别 · 计算机科学 2024-10-25 Stefan Brandstätter , Philipp Seeböck , Christoph Fürböck , Svitlana Pochepnia , Helmut Prosch , Georg Langs

Multi-slice magnetic resonance images of the fetal brain are usually contaminated by severe and arbitrary fetal and maternal motion. Hence, stable and robust motion correction is necessary to reconstruct high-resolution 3D fetal brain…

图像与视频处理 · 电气工程与系统科学 2022-09-23 Wen Shi , Haoan Xu , Cong Sun , Jiwei Sun , Yamin Li , Xinyi Xu , Tianshu Zheng , Yi Zhang , Guangbin Wang , Dan Wu

The objective of this work is to segment any arbitrary structures of interest (SOI) in 3D volumes by only annotating a single slice, (i.e. semi-automatic 3D segmentation). We show that high accuracy can be achieved by simply propagating the…

计算机视觉与模式识别 · 计算机科学 2021-07-12 Pak-Hei Yeung , Ana I. L. Namburete , Weidi Xie

During the last decades, the research community of medical imaging has witnessed continuous advances in image registration methods, which pushed the limits of the state-of-the-art and enabled the development of novel medical procedures. A…

计算机视觉与模式识别 · 计算机科学 2017-05-02 Enzo Ferrante , Nikos Paragios

Rigid slice-to-volume registration is a challenging task, which finds application in medical imaging problems like image fusion for image guided surgeries and motion correction for volume reconstruction. It is usually formulated as an…

计算机视觉与模式识别 · 计算机科学 2016-08-22 Roque Porchetto , Franco Stramana , Nikos Paragios , Enzo Ferrante

We present a novel approach to variational volume reconstruction from sparse, noisy slice data using the Deep Ritz method. Motivated by biomedical imaging applications such as MRI-based slice-to-volume reconstruction (SVR), our approach…

图像与视频处理 · 电气工程与系统科学 2025-08-13 Conor Rowan , Sumedh Soman , John A. Evans

Although the use of multiple stacks can handle slice-to-volume motion correction and artifact removal problems, there are still several problems: 1) The slice-to-volume method usually uses slices as input, which cannot solve the problem of…

图像与视频处理 · 电气工程与系统科学 2023-10-17 Junpeng Tan , Xin Zhang , Yao Lv , Xiangmin Xu , Gang Li

Accurately estimating and correcting the motion artifacts are crucial for 3D image reconstruction of the abdominal and in-utero magnetic resonance imaging (MRI). The state-of-art methods are based on slice-to-volume registration (SVR) where…

图像与视频处理 · 电气工程与系统科学 2019-08-29 Tong Zhang , Laurence H. Jackson , Alena Uus , James R. Clough , Lisa Story , Mary A. Rutherford , Joseph V. Hajnal , Maria Deprez

Despite the increasing use of deep learning in medical image segmentation, the limited availability of annotated training data remains a major challenge due to the time-consuming data acquisition and privacy regulations. In the context of…

图像与视频处理 · 电气工程与系统科学 2024-06-11 Aghiles Kebaili , Jérôme Lapuyade-Lahorgue , Pierre Vera , Su Ruan

Recovering high-fidelity 3D images from sparse or degraded 2D images is a fundamental challenge in medical imaging, with broad applications ranging from 3D ultrasound reconstruction to MRI super-resolution. In the context of fetal MRI,…

计算机视觉与模式识别 · 计算机科学 2025-12-17 Maik Dannecker , Steven Jia , Nil Stolt-Ansó , Nadine Girard , Guillaume Auzias , François Rousseau , Daniel Rueckert

Background and Objective: The lack of benchmark datasets has impeded the development of slice-to-volume registration algorithms. Such datasets are difficult to annotate, primarily due to the dimensional difference within data and the dearth…

人机交互 · 计算机科学 2023-11-28 Weixun Luo , Alexandre Triay Bagur , Paul Aljabar , George Ralli , Sir Michael Brady
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