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The recent advancements in graph neural networks (GNNs) have led to state-of-the-art performances in various applications, including chemo-informatics, question-answering systems, and recommender systems. However, scaling up these methods…

机器学习 · 计算机科学 2022-03-30 Ryoma Sato , Makoto Yamada , Hisashi Kashima

Discrete-state denoising diffusion models led to state-of-the-art performance in graph generation, especially in the molecular domain. Recently, they have been transposed to continuous time, allowing more flexibility in the reverse process…

机器学习 · 计算机科学 2024-10-07 Antoine Siraudin , Fragkiskos D. Malliaros , Christopher Morris

Understanding dynamic 3D environment is crucial for robotic agents and many other applications. We propose a novel neural network architecture called $MeteorNet$ for learning representations for dynamic 3D point cloud sequences. Different…

计算机视觉与模式识别 · 计算机科学 2020-02-11 Xingyu Liu , Mengyuan Yan , Jeannette Bohg

Generative models have achieved success in producing semantically plausible 2D images, but it remains challenging in 3D generation due to the absence of spatial geometry constraints. Typically, existing methods utilize geometric features as…

计算机视觉与模式识别 · 计算机科学 2026-03-09 Haonan Wang , Hanyu Zhou , Haoyue Liu , Tao Gu , Luxin Yan

This work introduces MiDi, a novel diffusion model for jointly generating molecular graphs and their corresponding 3D arrangement of atoms. Unlike existing methods that rely on predefined rules to determine molecular bonds based on the 3D…

机器学习 · 计算机科学 2023-06-06 Clement Vignac , Nagham Osman , Laura Toni , Pascal Frossard

Graph neural networks (GNNs) and message passing neural networks (MPNNs) have been proven to be expressive for subgraph structures in many applications. Some applications in heterogeneous graphs require explicit edge modeling, such as…

机器学习 · 计算机科学 2021-12-17 Xin Liu , Yangqiu Song

Scene graphs are a compact and explicit representation successfully used in a variety of 2D scene understanding tasks. This work proposes a method to incrementally build up semantic scene graphs from a 3D environment given a sequence of…

计算机视觉与模式识别 · 计算机科学 2021-04-01 Shun-Cheng Wu , Johanna Wald , Keisuke Tateno , Nassir Navab , Federico Tombari

Graph Neural Networks (GNNs) are key tools for graph representation learning, demonstrating strong results across diverse prediction tasks. In this paper, we present Convexified Message-Passing Graph Neural Networks (CGNNs), a novel and…

机器学习 · 计算机科学 2026-01-27 Saar Cohen , Noa Agmon , Uri Shaham

Neural message passing on molecular graphs is one of the most promising methods for predicting formation energy and other properties of molecules and materials. In this work we extend the neural message passing model with an edge update…

机器学习 · 统计学 2018-06-11 Peter Bjørn Jørgensen , Karsten Wedel Jacobsen , Mikkel N. Schmidt

Graph Neural Networks (GNNs) have become essential for handling large-scale graph applications. However, the computational demands of GNNs necessitate the development of efficient methods to accelerate inference. Mixed precision…

机器学习 · 计算机科学 2025-05-15 Samir Moustafa , Nils M. Kriege , Wilfried N. Gansterer

A large number of real-world graphs or networks are inherently heterogeneous, involving a diversity of node types and relation types. Heterogeneous graph embedding is to embed rich structural and semantic information of a heterogeneous…

社会与信息网络 · 计算机科学 2020-04-01 Xinyu Fu , Jiani Zhang , Ziqiao Meng , Irwin King

Graph, as an important data representation, is ubiquitous in many real world applications ranging from social network analysis to biology. How to correctly and effectively learn and extract information from graph is essential for a large…

机器学习 · 计算机科学 2020-10-27 Xiaodong Jiang , Ronghang Zhu , Pengsheng Ji , Sheng Li

Well-designed molecular representations (fingerprints) are vital to combine medical chemistry and deep learning. Whereas incorporating 3D geometry of molecules (i.e. conformations) in their representations seems beneficial, current 3D…

机器学习 · 计算机科学 2021-05-11 Ziyao Li , Shuwen Yang , Guojie Song , Lingsheng Cai

The prosperity of computer vision (CV) and natural language procession (NLP) in recent years has spurred the development of deep learning in many other domains. The advancement in machine learning provides us with an alternative option…

机器学习 · 计算机科学 2020-12-02 Chen Qian , Yunhai Xiong , Xiang Chen

Graph convolutional network (GCN) based approaches have achieved significant progress for solving complex, graph-structured problems. GCNs incorporate the graph structure information and the node (or edge) features through message passing…

机器学习 · 计算机科学 2021-05-04 Saurav Manchanda , Da Zheng , George Karypis

Molecular representation learning has attracted much attention recently. A molecule can be viewed as a 2D graph with nodes/atoms connected by edges/bonds, and can also be represented by a 3D conformation with 3-dimensional coordinates of…

机器学习 · 计算机科学 2022-07-20 Jinhua Zhu , Yingce Xia , Lijun Wu , Shufang Xie , Tao Qin , Wengang Zhou , Houqiang Li , Tie-Yan Liu

Designing new molecules is essential for drug discovery and material science. Recently, deep generative models that aim to model molecule distribution have made promising progress in narrowing down the chemical research space and generating…

生物大分子 · 定量生物学 2023-06-06 Han Huang , Leilei Sun , Bowen Du , Weifeng Lv

As three-dimensional acquisition technologies like LiDAR cameras advance, the need for efficient transmission of 3D point clouds is becoming increasingly important. In this paper, we present a novel semantic communication (SemCom) approach…

新兴技术 · 计算机科学 2025-05-13 Shangzhuo Xie , Qianqian Yang , Yuyi Sun , Tianxiao Han , Zhaohui Yang , Zhiguo Shi

Graph Neural Networks (GNNs) have seen significant advances in recent years, yet their application to multigraphs, where parallel edges exist between the same pair of nodes, remains under-explored. Standard GNNs, designed for simple graphs,…

机器学习 · 计算机科学 2024-12-11 H. Çağrı Bilgi , Lydia Y. Chen , Kubilay Atasu

This work provides an architecture to enable robotic grasp planning via shape completion. Shape completion is accomplished through the use of a 3D convolutional neural network (CNN). The network is trained on our own new open source dataset…

机器人学 · 计算机科学 2017-03-03 Jacob Varley , Chad DeChant , Adam Richardson , Joaquín Ruales , Peter Allen