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Liquid-liquid phase separation is key to understanding aqueous two-phase systems (ATPS) arising throughout cell biology, medical science, and the pharmaceutical industry. Controlling the detailed morphology of phase-separating compound…

Among various possible causes of autoimmune disease, an important role is played by infections that can result in a breakdown of immune tolerance, primarily through the mechanism of "molecular mimicry". In this paper we propose and analyse…

组织与器官 · 定量生物学 2018-05-21 F. Fatehi , S. N. Kyrychko , A. Ross , Y. N. Kyrychko , K. B. Blyuss

Cells often exhibit different and stable phenotypes from the same DNA sequence. Robustness and plasticity of such cellular states are controlled by diverse transcriptional and epigenetic mechanisms, among them the modification of…

分子网络 · 定量生物学 2015-06-18 Daniel Jost

What characterises a solid is its way to respond to external stresses. Ordered solids, such crystals, display an elastic regime followed by a plastic one, both well understood microscopically in terms of lattice distortion and dislocations.…

软凝聚态物质 · 物理学 2016-12-21 Giulio Biroli , Pierfrancesco Urbani

In biology, cells undergo deformations under the action of flow caused by the fluid surrounding them. These flows lead to shape changes and instabilities that have been explored in detail for single component vesicles. However, cell…

流体动力学 · 物理学 2025-10-15 Anirudh Venkatesh , Vivek Narsimhan

A two PDEs-based model is developed for studies of a morphological and compositional evolution of a thermodynamically stable alloy surface in a strong electric field, assuming different and anisotropic diffusional mobilities of the two…

材料科学 · 物理学 2015-06-18 Mikhail Khenner , Mahdi Bandegi

The shapes of epithelial tissues result from a complex interplay of contractile forces in the cytoskeleta of the cells in the tissue, and adhesion forces between them. A host of discrete, cell-based models describe these forces by assigning…

软凝聚态物质 · 物理学 2019-02-27 Pierra A. Haas , Raymond E. Goldstein

Understanding interactions between microparticles and lipid membranes is of increasing importance, especially for unraveling the influence of microplastics on our health and environment. Here, we study how a short-ranged adhesive force…

软凝聚态物质 · 物理学 2017-10-11 Casper van der Wel , Doris Heinrich , Daniela J. Kraft

We study the thermodynamics of binary mixtures with the volume fraction of the minority component less than the amount required to form a flat interface and show that the surface tension dominated equilibrium phase of the mixture forms a…

软凝聚态物质 · 物理学 2023-03-07 Subhadip Biswas , Biswaroop Mukherjee , Buddhapriya Chakrabarti

Dynamic facilitation theory assumes short-ranged dynamic constraints to be the essential feature of supercooled liquids and draws much of its conclusions from the study of kinetically constrained models. While deceptively simple, these…

材料科学 · 物理学 2012-06-12 Thomas Speck , David Chandler

Systems with long-range interactions when quenced into a metastable state near the pseudo-spinodal exhibit nucleation processes that are quite different from the classical nucleation seen near the coexistence curve. In systems with…

材料科学 · 物理学 2009-11-07 W. Klein , T. Lookman , A. Saxena , D. Hatch

We study nonequilibrium dynamical properties of inhomogeneous systems, in particular at a free surface or at a defect plane. Thereby we consider nonconserved (model-A) dynamics of a system which is prepared in the high-temperature phase and…

统计力学 · 物理学 2009-11-10 Michel Pleimling , Ferenc Igloi

The spatiotemporal oscillations of the Min proteins in the bacterium Escherichia coli play an important role in cell division. A number of different models have been proposed to explain the dynamics from the underlying biochemistry. Here,…

亚细胞过程 · 定量生物学 2013-05-29 Peter Borowski , Eric N. Cytrynbaum

Using an analytically tractable lattice model for reaction-diffusion processes of hard-core particles we demonstrate that under nonequilibrium conditions phase coexistence may arise even if the system is effectively one-dimensional as e.g.…

统计力学 · 物理学 2007-05-23 Fatemeh Tabatabaei , Gunter M. Schütz

A theoretical model for stratified epithelium is presented. The viscoelastic properties of the tissue is assumed to be dependent on the spatial distribution of proliferative and differentiated cells. Based on this assumption, a hydrodynamic…

生物物理 · 物理学 2016-06-08 Wei-Ting Yeh , Hsuan-Yi Chen

Hemostasis and thrombosis are often thought as two sides of the same clotting mechanism whereas hemostasis is a natural protective mechanism to prevent bleeding and thrombosis is a blood clot abnormally formulated inside a blood vessel,…

组织与器官 · 定量生物学 2019-11-19 Limei Cheng , Guo-Wei Wei , Tarek Leil

Apoptosis is an important area of research because of its role in keeping a mature multicellular organism's number of cells constant hence, ensuring that the organism does not have cell accumulation that may transform into cancer with…

分子网络 · 定量生物学 2010-10-01 Elife Zerrin Bagci , Sercan Murat Sen , Mehmet Cihan Camurdan

We analyze a simple model of deterministic diffusion. The model consists of a one-dimensional periodic array of scatterers in which point particles move from cell to cell as defined by a piecewise linear map. The microscopic chaotic…

chao-dyn · 物理学 2009-10-31 R. Klages , J. R. Dorfman

The directed migration of cells toward stiffer substrate regions or durotaxis is relevant to tissue development and tumor progression. Here, we introduce a phenomenological model for single cell durotaxis that incorporates both elastic…

软凝聚态物质 · 物理学 2024-12-24 Subhaya Bose , Haiqin Wang , Xinpeng Xu , Arvind Gopinath , Kinjal Dasbiswas

Biofilms, bacteria cells surrounded by a self-produced polymeric matrix, are common on medical devices and lead to many hospital infections. The biofilm lifecycle includes disassembly and dispersion, where bacteria clusters detach from the…

定量方法 · 定量生物学 2026-05-18 Yuehui Xu , Jasmine A. F. Kreig , Zhuoran Wang , Elizabeth J. Stewart , Rayanne A. Luke , Sarah D. Olson