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Graph Transformer, due to its global attention mechanism, has emerged as a new tool in dealing with graph-structured data. It is well recognized that the global attention mechanism considers a wider receptive field in a fully connected…

机器学习 · 计算机科学 2024-05-27 Yujie Xing , Xiao Wang , Yibo Li , Hai Huang , Chuan Shi

Graph foundation models have demonstrated remarkable adaptability across diverse downstream tasks through large-scale pretraining on graphs. However, existing implementations of the backbone model, graph transformers, are typically limited…

分布式、并行与集群计算 · 计算机科学 2026-04-21 Jun-Liang Lin , Kamesh Madduri , Mahmut Taylan Kandemir

Graph structure learning is a well-established problem that aims at optimizing graph structures adaptive to specific graph datasets to help message passing neural networks (i.e., GNNs) to yield effective and robust node embeddings. However,…

机器学习 · 计算机科学 2023-06-21 Wentao Zhao , Qitian Wu , Chenxiao Yang , Junchi Yan

Graph Neural Networks (GNNs) have emerged as powerful tools for learning representations from structured data. Despite their growing popularity and success across various applications, GNNs encounter several challenges that limit their…

机器学习 · 计算机科学 2026-02-03 Yassine Abbahaddou

Graph transformers need strong inductive biases to derive meaningful attention scores. Yet, current methods often fall short in capturing longer ranges, hierarchical structures, or community structures, which are common in various graphs…

机器学习 · 计算机科学 2024-05-28 Yuankai Luo , Hongkang Li , Lei Shi , Xiao-Ming Wu

Graph neural networks (GNN) suffer from severe inefficiency. It is mainly caused by the exponential growth of node dependency with the increase of layers. It extremely limits the application of stochastic optimization algorithms so that the…

机器学习 · 计算机科学 2024-04-23 Hongyuan Zhang , Yanan Zhu , Xuelong Li

Graph-based Sequential Recommender systems (GSRs) have gained significant research attention due to their ability to simultaneously handle user-item interactions and sequential relationships between items. Current GSRs often utilize…

信息检索 · 计算机科学 2025-03-05 Jinyu Zhang , Chao Li , Zhongying Zhao

Transformers are the basis of modern large language models, but relatively little is known about their precise expressive power on graphs. We study the expressive power of graph transformers (GTs) by Dwivedi and Bresson (2020) and…

计算机科学中的逻辑 · 计算机科学 2026-02-19 Veeti Ahvonen , Maurice Funk , Damian Heiman , Antti Kuusisto , Carsten Lutz

Graph transformers are a recent advancement in machine learning, offering a new class of neural network models for graph-structured data. The synergy between transformers and graph learning demonstrates strong performance and versatility…

机器学习 · 计算机科学 2025-12-23 Ahsan Shehzad , Feng Xia , Shagufta Abid , Ciyuan Peng , Shuo Yu , Dongyu Zhang , Karin Verspoor

We present a generalization of Transformers to any-order permutation invariant data (sets, graphs, and hypergraphs). We begin by observing that Transformers generalize DeepSets, or first-order (set-input) permutation invariant MLPs. Then,…

机器学习 · 计算机科学 2022-01-25 Jinwoo Kim , Saeyoon Oh , Seunghoon Hong

Graph representation learning (GRL) methods, such as graph neural networks and graph transformer models, have been successfully used to analyze graph-structured data, mainly focusing on node classification and link prediction tasks.…

机器学习 · 计算机科学 2023-08-21 Van Thuy Hoang , O-Joun Lee

Graph neural networks (GNNs) have achieved remarkable success in a variety of machine learning tasks over graph data. Existing GNNs usually rely on message passing, i.e., computing node representations by gathering information from the…

机器学习 · 计算机科学 2024-10-15 Junru Zhou , Cai Zhou , Xiyuan Wang , Pan Li , Muhan Zhang

Graph Neural Networks (GNNs) have attracted considerable attention and have emerged as a new promising paradigm to process graph-structured data. GNNs are usually stacked to multiple layers and the node representations in each layer are…

机器学习 · 计算机科学 2020-09-25 Yihao Chen , Xin Tang , Xianbiao Qi , Chun-Guang Li , Rong Xiao

Graph neural networks (GNNs) have significantly improved the representation power for graph-structured data. Despite of the recent success of GNNs, the graph convolution in most GNNs have two limitations. Since the graph convolution is…

机器学习 · 计算机科学 2021-12-30 Jinyoung Park , Sungdong Yoo , Jihwan Park , Hyunwoo J. Kim

Transformers were originally proposed as a sequence-to-sequence model for text but have become vital for a wide range of modalities, including images, audio, video, and undirected graphs. However, transformers for directed graphs are a…

机器学习 · 计算机科学 2023-09-01 Simon Geisler , Yujia Li , Daniel Mankowitz , Ali Taylan Cemgil , Stephan Günnemann , Cosmin Paduraru

Message-passing Graph Neural Networks (GNNs) are often criticized for their limited expressiveness, issues like over-smoothing and over-squashing, and challenges in capturing long-range dependencies. Conversely, Graph Transformers (GTs) are…

机器学习 · 计算机科学 2025-11-04 Yuankai Luo , Lei Shi , Xiao-Ming Wu

Graph neural networks have been extensively studied for learning with inter-connected data. Despite this, recent evidence has revealed GNNs' deficiencies related to over-squashing, heterophily, handling long-range dependencies, edge…

机器学习 · 计算机科学 2023-06-16 Qitian Wu , Wentao Zhao , Zenan Li , David Wipf , Junchi Yan

Recently, Graph Transformers have emerged as a promising solution to alleviate the inherent limitations of Graph Neural Networks (GNNs) and enhance graph representation performance. Unfortunately, Graph Transformers are computationally…

神经与进化计算 · 计算机科学 2024-03-26 Yundong Sun , Dongjie Zhu , Yansong Wang , Zhaoshuo Tian , Ning Cao , Gregory O'Hared

Graph Convolutional Networks (GCNs) are extensively utilized for deep learning on graphs. The large data sizes of graphs and their vertex features make scalable training algorithms and distributed memory systems necessary. Since the…

机器学习 · 计算机科学 2022-12-14 Gunduz Vehbi Demirci , Aparajita Haldar , Hakan Ferhatosmanoglu

Current graph neural networks (GNNs) lack generalizability with respect to scales (graph sizes, graph diameters, edge weights, etc..) when solving many graph analysis problems. Taking the perspective of synthesizing graph theory programs,…

机器学习 · 计算机科学 2020-10-27 Hao Tang , Zhiao Huang , Jiayuan Gu , Bao-Liang Lu , Hao Su