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Multiplex Imaging (MI) enables the simultaneous visualization of multiple biological markers in separate imaging channels at subcellular resolution, providing valuable insights into cell-type heterogeneity and spatial organization. However,…

图像与视频处理 · 电气工程与系统科学 2024-11-07 Simon Gutwein , Daria Lazic , Thomas Walter , Sabine Taschner-Mandl , Roxane Licandro

In this paper, we aim to learn a mapping (or embedding) from images to a compact binary space in which Hamming distances correspond to a ranking measure for the image retrieval task. We make use of a triplet loss because this has been shown…

计算机视觉与模式识别 · 计算机科学 2016-08-02 Bohan Zhuang , Guosheng Lin , Chunhua Shen , Ian Reid

Graph embedding provides a feasible methodology to conduct pattern classification for graph-structured data by mapping each data into the vectorial space. Various pioneering works are essentially coding method that concentrates on a…

机器学习 · 计算机科学 2022-10-04 Xue Liu , Dan Sun , Xiaobo Cao , Hao Ye , Wei Wei

Automated cell segmentation is crucial for various biological and medical applications, facilitating tasks like cell counting, morphology analysis, and drug discovery. However, manual segmentation is time-consuming and prone to…

机器学习 · 计算机科学 2024-09-13 Aaron Rock Menezes , Bharath Ramsundar

We present a novel embedding approach for video instance segmentation. Our method learns a spatio-temporal embedding integrating cues from appearance, motion, and geometry; a 3D causal convolutional network models motion, and a monocular…

计算机视觉与模式识别 · 计算机科学 2019-12-20 Anthony Hu , Alex Kendall , Roberto Cipolla

Though performed almost effortlessly by humans, segmenting 2D gray-scale or color images into respective regions of interest (e.g.~background, objects, or portions of objects) constitutes one of the greatest challenges in science and…

计算机视觉与模式识别 · 计算机科学 2023-08-23 Alexandre Benatti , Luciano da F. Costa

Recognition of objects with subtle differences has been used in many practical applications, such as car model recognition and maritime vessel identification. For discrimination of the objects in fine-grained detail, we focus on deep…

计算机视觉与模式识别 · 计算机科学 2019-07-23 Kaan Karaman , Erhan Gundogdu , Aykut Koc , A. Aydin Alatan

Semantic and instance segmentation algorithms are two general yet distinct image segmentation solutions powered by Convolution Neural Network. While semantic segmentation benefits extensively from the end-to-end training strategy, instance…

计算机视觉与模式识别 · 计算机科学 2021-03-30 Jianfeng Cao , Hong Yan

The mother machine is a popular microfluidic device that allows long-term time-lapse imaging of thousands of cells in parallel by microscopy. It has become a valuable tool for single-cell level quantitative analysis and characterization of…

图像与视频处理 · 电气工程与系统科学 2020-09-22 Jean Ollion , Charles Ollion

Transfer learning for feature extraction can be used to exploit deep representations in contexts where there is very few training data, where there are limited computational resources, or when tuning the hyper-parameters needed for training…

We propose a simple discrete time semi-supervised graph embedding approach to link prediction in dynamic networks. The learned embedding reflects information from both the temporal and cross-sectional network structures, which is performed…

机器学习 · 统计学 2016-10-17 Ryohei Hisano

Deep convolutional neural networks (CNNs) are state-of-the-art for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor…

计算机视觉与模式识别 · 计算机科学 2019-07-29 Zhenlin Xu , Marc Niethammer

Detecting the occlusion from stereo images or video frames is important to many computer vision applications. Previous efforts focus on bundling it with the computation of disparity or optical flow, leading to a chicken-and-egg problem. In…

计算机视觉与模式识别 · 计算机科学 2018-09-25 Ang Li , Zejian Yuan

We introduce DeepCell, a novel circuit representation learning framework that effectively integrates multiview information from both And-Inverter Graphs (AIGs) and Post-Mapping (PM) netlists. At its core, DeepCell employs a self-supervised…

Current Deep Learning methods for environment segmentation and velocity estimation rely on Convolutional Recurrent Neural Networks to exploit spatio-temporal relationships within obtained sensor data. These approaches derive scene dynamics…

计算机视觉与模式识别 · 计算机科学 2023-06-21 Marco Braun , Moritz Luszek , Mirko Meuter , Dominic Spata , Kevin Kollek , Anton Kummert

Although deep encoder-decoder networks have achieved astonishing performance for mitochondria segmentation from electron microscopy (EM) images, they still produce coarse segmentations with lots of discontinuities and false positives.…

计算机视觉与模式识别 · 计算机科学 2020-01-30 Zhimin Yuan , Jiajin Yi , Zhengrong Luo , Zhongdao Jia , Jialin Peng

Semantic segmentation of microscopic cell images using deep learning is an important technique, however, it requires a large number of images and ground truth labels for training. To address the above problem, we consider an efficient…

计算机视觉与模式识别 · 计算机科学 2023-04-18 Sota Kato , Kazuhiro Hotta

This article firstly attempts to explore parallel algorithms of learning distributed representations for both entities and relations in large-scale knowledge repositories with {\it MapReduce} programming model on a multi-core processor. We…

分布式、并行与集群计算 · 计算机科学 2015-09-04 Miao Fan , Qiang Zhou , Thomas Fang Zheng , Ralph Grishman

Deep learning has led to state-of-the-art results for many medical imaging tasks, such as segmentation of different anatomical structures. With the increased numbers of deep learning publications and openly available code, the approach to…

图像与视频处理 · 电气工程与系统科学 2020-05-19 Tom van Sonsbeek , Veronika Cheplygina

The proposed method extends upon the representational output of semantic instance segmentation by explicitly including both visible and occluded parts. A fully convolutional network is trained to produce consistent pixel-level embedding…

计算机视觉与模式识别 · 计算机科学 2020-02-18 Yanfeng Liu , Eric Psota , Lance Pérez