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We review the theoretical analyses and simulations of the interactions between curvature-inducing proteins and biomembranes. Laterally isotropic proteins induce spherical budding, whereas anisotropic proteins, such as Bin/Amphiphysin/Rvs…

软凝聚态物质 · 物理学 2023-03-10 Hiroshi Noguchi

Many types of peripheral and transmembrane proteins can sense and generate membrane curvature. Laterally isotropic proteins and crescent proteins with twofold rotational symmetry, such as Bin/Amphiphysin/Rvs superfamily proteins, have been…

软凝聚态物质 · 物理学 2024-02-12 Hiroshi Noguchi

Cell membranes interact with a myriad of curvature-active proteins that control membrane morphology and are responsible for mechanosensation and mechanotransduction. Some of these proteins, such as those containing BAR domains, are curved…

软凝聚态物质 · 物理学 2020-09-21 Caterina Tozzi , Nikhil Walani , Anabel-Lise Le Roux , Pere Roca-Cusachs , Marino Arroyo

A tethered vesicle, which consists of a cylindrical membrane tube and a spherical vesicle, is produced by a mechanical force that is experimentally imposed by optical tweezers and a micropipette. This tethered vesicle is employed for…

软凝聚态物质 · 物理学 2021-12-30 Hiroshi Noguchi

There are a great many proteins that localize to and collectively generate curvature in biological fluid membranes. We study changes in the topology of fluid membranes due to the presence of highly anisotropic, curvature-inducing proteins.…

软凝聚态物质 · 物理学 2015-05-19 Kiyotaka Akabori , C. D. Santangelo

The Bin/amphiphysin/Rvs (BAR) superfamily proteins have a crescent binding domain and bend biomembranes along the domain axis. However, their anisotropic bending rigidities and spontaneous curvatures have not been experimentally determined.…

软凝聚态物质 · 物理学 2023-07-28 Hiroshi Noguchi , Nikhil Walani , Marino Arroyo

Membrane proteins are crucial in regulating biomembrane shapes and controlling the dynamic changes in membrane morphology during essential cellular processes. These proteins can localize to regions with their preferred curvatures (curvature…

软凝聚态物质 · 物理学 2025-05-26 Hiroshi Noguchi

BAR superfamily proteins have a banana-shaped domain that causes the local bending of lipid membranes. We study as to how such a local anisotropic curvature induces effective interaction between proteins and changes the global shape of…

软凝聚态物质 · 物理学 2014-11-26 Hiroshi Noguchi

Plasma membrane tubes are ubiquitous in cellular membranes and in the membranes of intracellular organelles. They play crucial roles in trafficking, ion transport, and cellular motility. The formation of plasma membrane tubes can be due to…

软凝聚态物质 · 物理学 2022-06-09 Arijit Mahapatra , Padmini Rangamani

Curvature-inducing proteins containing a Bin/Amphiphysin/Rvs domain often have intrinsically disordered domains. Recent experiments have shown that these disordered chains enhance curvature sensing and generation. Here, we report on the…

软凝聚态物质 · 物理学 2022-07-20 Hiroshi Noguchi

Vesicle budding induced by protein binding that generates an isotropic spontaneous curvature is studied using a mean-field theory. Many spherical buds are formed via protein binding. As the binding chemical potential increases, the proteins…

软凝聚态物质 · 物理学 2021-07-30 Hiroshi Noguchi

The assembly of curved protein rods on fluid membranes is studied using implicit-solvent meshless membrane simulations. As the rod curvature increases, the rods on a membrane tube assemble along the azimuthal direction first and…

软凝聚态物质 · 物理学 2016-05-18 Hiroshi Noguchi

Collective behavior of proteins on biomembranes is usually studied within the spontaneous curvature model. Here we consider an alternative phenomenological approach, which accounts consistently for partial ordering of proteins as well as…

软凝聚态物质 · 物理学 2014-09-03 O. V. Manyuhina

Symmetry is closely intertwined with the function, genetics, and chemical properties of multiprotein complexes. Here, we explore the relation between structural symmetry and the ability of membrane proteins to sense and induce membrane…

生物物理 · 物理学 2018-10-19 Federico Elías-Wolff , Alexander Lyubartsev , Erik G. Brandt , Martin Lindén

Endocytosis is an essential biological process for the trafficking of macromolecules (cargo) and membrane proteins in cells. In yeast cells, this involves the invagination of a tubular structure on the membrane and the formation of…

软凝聚态物质 · 物理学 2022-11-18 Ke Xiao , Chen-Xu Wu , Rui Ma

In living cells, membrane morphology is regulated by various proteins. Many membrane reshaping proteins contain a Bin/Amphiphysin/Rvs (BAR) domain, which consists of a banana-shaped rod. The BAR domain bends the biomembrane along the rod…

软凝聚态物质 · 物理学 2016-02-15 Hiroshi Noguchi

Many proteins and peptides have an intrinsic capacity to sense and induce membrane curvature, and play crucial roles for organizing and remodelling cell membranes. However, the molecular driving forces behind these processes are not well…

生物物理 · 物理学 2023-07-19 Jordi Gómez-Llobregat , Federico Elías-Wolff , Martin Lindén

Cellular membranes exhibit a large variety of shapes, strongly coupled to their function. Many biological processes involve dynamic reshaping of membranes, usually mediated by proteins. This interaction works both ways: while proteins…

软凝聚态物质 · 物理学 2018-06-12 Afshin Vahid , Anđela Šarić , Timon Idema

The adhesion of biomembranes is mediated by the binding of membrane-anchored receptor and ligand proteins. The proteins can only bind if the separation between apposing membranes is sufficiently close to the length of the protein complexes,…

亚细胞过程 · 定量生物学 2019-11-22 Thomas R. Weikl , Jinglei Hu , Batuhan Kav , Bartosz Rozycki

We model membrane proteins as anisotropic objects characterized by symmetric-traceless tensors and determine the coupling between these order-parameters and membrane curvature. We consider the interactions between transmembrane proteins…

凝聚态物理 · 物理学 2009-10-28 Jeong-Man Park , T. C. Lubensky
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