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The correlations of several fundamental properties of human brain connections are investigated in a consensus connectome, constructed from 1064 braingraphs, each on 1015 vertices, corresponding to 1015 anatomical brain areas. The properties…

神经元与认知 · 定量生物学 2024-04-22 Dániel Hegedűs , Vince Grolmusz

We propose a data-driven approach to represent neuronal network dynamics as a Probabilistic Graphical Model (PGM). Our approach learns the PGM structure by employing dimension reduction to network response dynamics evoked by stimuli applied…

神经元与认知 · 定量生物学 2017-11-02 Hexuan Liu , Jimin Kim , Eli Shlizerman

The human brain is a complex network of interconnected brain regions organized into functional modules with distinct roles in cognition and behavior. An important question concerns the persistence and stability of these modules over the…

神经元与认知 · 定量生物学 2015-10-28 Richard F. Betzel , Bratislav Mišić , Ye He , Jeffrey Rumschlag , Xi-Nian Zuo , Olaf Sporns

Spatial patterns in the early fruit fly embryo emerge from a network of interactions among transcription factors, the gap genes, driven by maternal inputs. Such networks can exhibit many qualitatively different behaviors, separated by…

分子网络 · 定量生物学 2015-06-17 Dmitry Krotov , Julien O. Dubuis , Thomas Gregor , William Bialek

The human connectome is the object of an intensive research today. In these graphs, the vertices correspond to the small areas of the gray matter, and two vertices are connected by an edge, if a diffusion-MRI based workflow finds…

神经元与认知 · 定量生物学 2016-09-28 Csaba Kerepesi , Balázs Szalkai , Bálint Varga , Vince Grolmusz

Populations of oscillators are present throughout nature. Very often synchronization is observed in such populations if they are allowed to interact. A paradigmatic model for the study of such phenomena has been the Kuramoto model. However,…

适应与自组织系统 · 物理学 2022-06-08 Keith A. Kroma-Wiley , Peter J. Mucha , Dani S. Bassett

The architecture of the human connectome supports efficient communication protocols relying either on distances between brain regions or on the intensities of connections. However, none of these protocols combines information about the two…

神经元与认知 · 定量生物学 2024-10-07 Laia Barjuan , Jordi Soriano , M. Ángeles Serrano

The brain's functional connectivity fluctuates over time instead of remaining steady in a stationary mode even during the resting state. This fluctuation establishes the dynamical functional connectivity that transitions in a non-random…

神经元与认知 · 定量生物学 2022-03-28 Shikuang Deng , Jingwei Li , B. T. Thomas Yeo , Shi Gu

Mostly acyclic directed networks, treated mathematically as directed graphs, arise in machine learning, biology, social science, physics, and other applications. Newman [1] has noted the mathematical challenges of such networks. In this…

物理与社会 · 物理学 2019-03-26 B. Dribus , A. Sumner , K. Bist , N. Regmi , J. Sircar , S. Upreti

I provide numerical evidence for the robustness of the Griffiths phase (GP) reported previously in dynamical threshold model simulations on a large human brain network with N=836733 connected nodes. The model, with equalized network…

无序系统与神经网络 · 物理学 2019-03-27 Géza Ódor

We study the synchronization transition of Kuramoto oscillators in scale-free networks that are characterized by tunable local properties. Specifically, we perform a detailed finite size scaling analysis and inspect how the critical…

统计力学 · 物理学 2015-06-25 Jesus Gomez-Gardenes , Yamir Moreno

Human brain dynamics can be profitably viewed through the lens of statistical mechanics, where neurophysiological activity evolves around and between local attractors representing preferred mental states. Many physically-inspired models of…

神经元与认知 · 定量生物学 2016-09-06 Arian Ashourvan , Shi Gu , Marcelo G. Mattar , Jean M. Vettel , Danielle S. Bassett

Synchronization processes are ubiquitous despite the many connectivity patterns that complex systems can show. Usually, the emergence of synchrony is a macroscopic observable, however, the microscopic details of the system, as e.g. the…

物理与社会 · 物理学 2018-06-08 Lluis Arola-Fernandez , Albert Diaz-Guilera , Alex Arenas

A key question in modern neuroscience is how cognitive changes in a human brain can be quantified and captured by functional connectomes (FC) . A systematic approach to measure pairwise functional distance at different brain states is…

神经元与认知 · 定量生物学 2018-09-26 Enrico Amico , Alex Arenas , Joaquin Goni

Human brain connectome studies aim at extracting and analyzing relevant features associated to pathologies of interest. Usually this consists in modeling the brain connectome as a graph and in using graph metrics as features. A fine brain…

Neural systems show a modular and typically also a hierarchical organisation across different levels and across different species. Topology relates to function, but it is also influences dynamics as earlier studies showed its effect on…

神经元与认知 · 定量生物学 2014-05-15 Marcus Kaiser

Many natural and human-made complex systems feature group interactions that adapt over time in response to their dynamic states. However, most of the existing adaptive network models fall short of capturing these group dynamics, as they…

适应与自组织系统 · 物理学 2024-08-23 Md Sayeed Anwar , S. Nirmala Jenifer , Paulsamy Muruganandam , Dibakar Ghosh , Timoteo Carletti

The exploration of brain networks has reached an important milestone as relatively large and reliable information has been gathered for connectomes of different species. Analyses of connectome data sets reveal that the structural length and…

生物物理 · 物理学 2025-04-03 Michelle T. Cirunay , Rene C. Batac , Géza Odór

Synchronization is a fundamental phenomenon in complex systems, observed across a wide range of natural and engineered contexts. The Kuramoto model provides a foundational framework for understanding synchronization among coupled…

适应与自组织系统 · 物理学 2026-02-03 Riccardo Muolo , Hiroya Nakao , Marco Coraggio

Over the last years, a great deal of attention has been focused on complex networked systems, characterized by intricate structure and dynamics. The latter has been often represented in terms of overall statistics (e.g. average and standard…

数据分析、统计与概率 · 物理学 2011-09-15 Cesar H. Comin , João B. Bunoro , Matheus P. Viana , Luciano da F. Costa