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Pretrained contextualized language models such as BERT have achieved impressive results on various natural language processing benchmarks. Benefiting from multiple pretraining tasks and large scale training corpora, pretrained models can…

信息检索 · 计算机科学 2020-05-28 Zhiyu Chen , Mohamed Trabelsi , Jeff Heflin , Yinan Xu , Brian D. Davison

As a step toward better document-level understanding, we explore classification of a sequence of sentences into their corresponding categories, a task that requires understanding sentences in context of the document. Recent successful…

计算与语言 · 计算机科学 2021-03-24 Arman Cohan , Iz Beltagy , Daniel King , Bhavana Dalvi , Daniel S. Weld

Large, publicly available clinical datasets have emerged as a novel resource for understanding disease heterogeneity and to explore personalization of therapy. These datasets are derived from data not originally collected for research…

机器学习 · 计算机科学 2025-08-14 Anish Narain , Ritam Majumdar , Nikita Narayanan , Dominic Marshall , Sonali Parbhoo

The increasing complexity of clinical decision-making, alongside the rapid expansion of electronic health records (EHR), presents both opportunities and challenges for delivering data-informed care. This paper proposes a clinical decision…

人工智能 · 计算机科学 2025-10-03 Leon Garza , Anantaa Kotal , Michael A. Grasso , Emre Umucu

Large language models (LLMs) have recently showcased remarkable capabilities, spanning a wide range of tasks and applications, including those in the medical domain. Models like GPT-4 excel in medical question answering but may face…

Recognition of biomedical entities from literature is a challenging research focus, which is the foundation for extracting a large amount of biomedical knowledge existing in unstructured texts into structured formats. Using the sequence…

计算与语言 · 计算机科学 2021-05-18 Cong Sun , Zhihao Yang , Lei Wang , Yin Zhang , Hongfei Lin , Jian Wang

Mental disorders are clinically significant patterns of behavior that are associated with stress and/or impairment in social, occupational, or family activities. People suffering from such disorders are often misjudged and poorly diagnosed…

机器学习 · 计算机科学 2025-09-03 Abu Shad Ahammed , Sayeri Mukherjee , Roman Obermaisser

Large language models (LLMs) are becoming increasingly relevant as a potential tool for healthcare, aiding communication between clinicians, researchers, and patients. However, traditional evaluations of LLMs on medical exam questions do…

计算与语言 · 计算机科学 2023-09-19 Rojin Ziaei , Samuel Schmidgall

Objective: Healthcare data fragmentation presents a major challenge for linking patient data, necessitating robust record linkage to integrate patient records from diverse sources. This study investigates the feasibility of leveraging…

人工智能 · 计算机科学 2025-04-22 Mohammad Beheshti , Lovedeep Gondara , Iris Zachary

The clinical notes are usually typed into the system by physicians. They are typically required to be marked by standard medical codes, and each code represents a diagnosis or medical treatment procedure. Annotating these notes is time…

机器学习 · 计算机科学 2023-05-10 Guodong Liu

Clinical Decision Support Systems (CDSS) utilize evidence-based knowledge and patient data to offer real-time recommendations, with Large Language Models (LLMs) emerging as a promising tool to generate plain-text explanations for medical…

计算与语言 · 计算机科学 2023-10-04 D. Umerenkov , G. Zubkova , A. Nesterov

Biomedical Named Entity Recognition (NER) is a fundamental task of Biomedical Natural Language Processing for extracting relevant information from biomedical texts, such as clinical records, scientific publications, and electronic health…

计算与语言 · 计算机科学 2023-12-27 Fahime Shahrokh , Nasser Ghadiri , Rasoul Samani , Milad Moradi

Recent advances in natural language processing (NLP) can be largely attributed to the advent of pre-trained language models such as BERT and RoBERTa. While these models demonstrate remarkable performance on general datasets, they can…

Models trained to estimate word probabilities in context have become ubiquitous in natural language processing. How do these models use lexical cues in context to inform their word probabilities? To answer this question, we present a case…

计算与语言 · 计算机科学 2021-04-23 Kanishka Misra , Allyson Ettinger , Julia Taylor Rayz

Multimodal sentiment analysis has become an increasingly popular research area as the demand for multimodal online content is growing. For multimodal sentiment analysis, words can have different meanings depending on the linguistic context…

计算与语言 · 计算机科学 2022-09-16 Junghun Kim , Jihie Kim

Fine-tuned Bidirectional Encoder Representations from Transformers (BERT)-based sequence classification models have proven to be effective for detecting Alzheimer's Disease (AD) from transcripts of human speech. However, previous research…

计算与语言 · 计算机科学 2020-11-13 Aparna Balagopalan , Jekaterina Novikova

Prescription medications often impose temporal constraints on regular health behaviors (RHBs) of patients, e.g., eating before taking medication. Violations of such medical temporal constraints (MTCs) can result in adverse effects.…

Unstructured clinical text in EHRs contains crucial information for applications including decision support, trial matching, and retrospective research. Recent work has applied BERT-based models to clinical information extraction and text…

计算与语言 · 计算机科学 2020-11-13 Kexin Huang , Sankeerth Garapati , Alexander S. Rich

Much of natural language processing is focused on leveraging large capacity language models, typically trained over single messages with a task of predicting one or more tokens. However, modeling human language at higher-levels of context…

计算与语言 · 计算机科学 2021-11-03 Matthew Matero , Nikita Soni , Niranjan Balasubramanian , H. Andrew Schwartz

While composing a new document, anything from a news article to an email or essay, authors often utilize direct quotes from a variety of sources. Although an author may know what point they would like to make, selecting an appropriate quote…

计算与语言 · 计算机科学 2020-08-20 Ansel MacLaughlin , Tao Chen , Burcu Karagol Ayan , Dan Roth