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The paradigm for compartment models in epidemiology assumes exponentially distributed incubation and removal times, which is not realistic in actual populations. Commonly used variations with multiple exponentially distributed variables are…

种群与进化 · 定量生物学 2021-02-10 P. Hernández , C. Pena , A. Ramos , J. J. Gómez-Cadenas

We propose a method to sample stationary properties of solutions of stochastic differential equations, which is accurate and efficient if there are rarely visited regions or rare transitions between distinct regions of the state space. The…

统计力学 · 物理学 2016-03-23 Rüdiger Kürsten , Ulrich Behn

Recent work has shown the effectiveness of tensor network methods for computing large deviation functions in constrained stochastic models in the infinite time limit. Here we show that these methods can also be used to study the statistics…

统计力学 · 物理学 2022-03-08 Luke Causer , Mari Carmen Bañuls , Juan P. Garrahan

State preparation is a necessary component of many quantum algorithms. In this work, we combine a method for efficiently representing smooth differentiable probability distributions using matrix product states with recently discovered…

量子物理 · 物理学 2024-02-19 Jason Iaconis , Sonika Johri , Elton Yechao Zhu

In order to simulate the spread of infectious diseases, many epidemiological models use systems of ordinary differential equations (ODEs) to describe the underlying dynamics. These models incorporate the implicit assumption, that the stay…

动力系统 · 数学 2025-10-13 Lena Plötzke , Anna Wendler , René Schmieding , Martin J. Kühn

We consider a problem of inferring contact network from nodal states observed during an epidemiological process. In a black--box Bayesian optimisation framework this problem reduces to a discrete likelihood optimisation over the set of…

统计计算 · 统计学 2024-09-05 Sergey Dolgov , Dmitry Savostyanov

Here, a new two-dimensional process, discrete in time and space, that yields the results of both a random walk and a quantum random walk, is introduced. This model describes the population distribution of four coin states |1>,-|1>, |0> -|0>…

量子物理 · 物理学 2020-08-26 Arie Bar-Haim

Deterministic compartmental models are predominantly used in the modeling of infectious diseases, though stochastic models are considered more realistic, yet are complicated to estimate due to missing data. In this paper we present a novel…

统计计算 · 统计学 2022-06-22 Shuying Wang , Stephen G. Walker

We report an innovative model for predicting entanglement distribution between end parties of a quantum network using our in-house simulation algorithm. Our implementation is based on stochastic methods that are built upon a unique global…

量子物理 · 物理学 2025-09-11 Tasmi R. Ahmed , Fares Nada , Amber Hussain , Connor Kupchak

We present a flexible Bayesian semiparametric mixed model for longitudinal data analysis in the presence of potentially high-dimensional categorical covariates. Building on a novel hidden Markov tensor decomposition technique, our proposed…

统计方法学 · 统计学 2022-08-05 Giorgio Paulon , Peter Müller , Abhra Sarkar

Stochastic processes on graphs can describe a great variety of phenomena ranging from neural activity to epidemic spreading. While many existing methods can accurately describe typical realizations of such processes, computing properties of…

统计力学 · 物理学 2023-11-16 Stefano Crotti , Alfredo Braunstein

Many natural and engineered systems can be modeled as discrete state Markov processes. Often, only a subset of states are directly observable. Inferring the conditional probability that a system occupies a particular hidden state, given the…

信号处理 · 电气工程与系统科学 2023-01-04 Daniel Chen , Alexander G. Strang , Andrew W. Eckford , Peter J. Thomas

Throughout the course of an epidemic, the rate at which disease spreads varies with behavioral changes, the emergence of new disease variants, and the introduction of mitigation policies. Estimating such changes in transmission rates can…

统计方法学 · 统计学 2022-11-29 Jenny Huang , Raphaël Morsomme , David Dunson , Jason Xu

Diffusion models have achieved huge empirical success in data generation tasks. Recently, some efforts have been made to adapt the framework of diffusion models to discrete state space, providing a more natural approach for modeling…

机器学习 · 统计学 2024-02-15 Hongrui Chen , Lexing Ying

Random walks are a fundamental model in applied mathematics and are a common example of a Markov chain. The limiting stationary distribution of the Markov chain represents the fraction of the time spent in each state during the stochastic…

数值分析 · 计算机科学 2018-01-08 Austin R. Benson , David F. Gleich , Lek-Heng Lim

Global pandemics, such as the recent COVID-19 crisis, highlight the need for stochastic epidemic models that can capture the randomness inherent in the spread of disease. Such models must be accompanied by methods for estimating parameters…

定量方法 · 定量生物学 2026-04-13 Vincent Wieland , Nils Wassmuth , Lorenzo Contento , Martin Kühn , Jan Hasenauer

The contact process is an emblematic model of a non-equilibrium system, containing a phase transition between inactive and active dynamical regimes. In the epidemiological context, the model is known as the susceptible-infected-susceptible…

统计力学 · 物理学 2023-05-12 Wout Merbis , Clélia de Mulatier , Philippe Corboz

We define the projected entropy S(T) at a given temperature T in the context of an Ising model transition matrix calculation as the entropy associated with the distribution of Markov chain realizations in energy-magnetization, E-H, space.…

统计力学 · 物理学 2018-10-17 David Yevick

It is well known, mainly because of the work of Kurtz, that density dependent Markov chains can be approximated by sets of ordinary differential equations (ODEs) when their indexing parameter grows very large. This approximation cannot…

A stochastic SIR epidemic model taking into account the heterogeneity of the spatial environment is constructed. The deterministic model is given by a partial differential equation and the stochastic one by a space-time jump Markov process.…

概率论 · 数学 2024-12-10 Thierry Gallouët , Etienne Pardoux , Ténan Yeo