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Mitochondrial function relies on the coordinated expression of mitochondrial and nuclear genes, exhibiting remarkable resilience regardless the susceptibility of mitochondrial DNA (mtDNA) to accumulate harmful mutations. A suggested…

种群与进化 · 定量生物学 2024-10-16 Débora Princepe , Marcus A. M. de Aguiar

Mitochondrial genetic material is widely used for phylogenetic reconstruction and as a barcode for species identification. Here we study how mito-nuclear interactions affect the accuracy of species identification by mtDNA, as well as the…

种群与进化 · 定量生物学 2020-12-21 Debora Princepe , Marcus A. M. de Aguiar

Predicting the adaptation of populations to a changing environment is crucial to assess the impact of human activities on biodiversity. Many theoretical studies have tackled this issue by modeling the evolution of quantitative traits…

偏微分方程分析 · 数学 2022-06-28 Jimmy Garnier , O Cotto , T Bourgeron , E Bouin , T Lepoutre , O Ronce , V Calvez

Population genetics struggles to model extinction; standard models track the relative rather than absolute fitness of genotypes, while the exceptions describe only the short-term transition from imminent doom to evolutionary rescue. But…

种群与进化 · 定量生物学 2017-02-20 Jason Bertram , Kevin Gomez , Joanna Masel

We compare and contrast the long-time dynamical properties of two individual-based models of biological coevolution. Selection occurs via multispecies, stochastic population dynamics with reproduction probabilities that depend nonlinearly…

种群与进化 · 定量生物学 2011-11-10 Per Arne Rikvold

Evolutionary and ecosystem dynamics are often treated as different processes --operating at separate timescales-- even if evidence reveals that rapid evolutionary changes can feed back into ecological interactions. A recent long-term field…

种群与进化 · 定量生物学 2018-10-04 Paula Villa Martín , Jorge Hidalgo , Rafael Rubio de Casas , Miguel A. Muñoz

We study the spatial rock-paper-scissors model, where resource competitors' cyclic dominance impacts organisms' energy levels. Our model assumes that failed selection interactions can lead to energy loss, reducing the chances of success in…

种群与进化 · 定量生物学 2023-06-06 J. Menezes , E. Rangel

Natural selection has produced an extraordinary diversity of life histories spanning many orders of magnitude in body size, vital rates, and biological times. In general, big and cold organisms grow and reproduce slowly and live long lives;…

种群与进化 · 定量生物学 2024-12-30 Joseph R. Burger

Many mathematical models of evolution assume that all individuals experience the same environment. Here, we study the Moran process in heterogeneous environments. The population is of finite size with two competing types, which are exposed…

种群与进化 · 定量生物学 2018-12-19 Kamran Kaveh , Alex McAvoy , Martin A. Nowak

We investigate a tritrophic system in which organisms' energy depletion, resulting from failed selection attempts, leads to a partial loss of capacity to win the cyclic spatial game. The energy required to maintain optimal organism fitness…

种群与进化 · 定量生物学 2024-06-05 J. Menezes , E. Rangel

Standard evolutionary theories of aging and mortality, implicitly based on assumptions of spatial averaging, hold that natural selection cannot favor shorter lifespan without direct compensating benefit to individual reproductive success.…

种群与进化 · 定量生物学 2015-06-15 Justin Werfel , Donald E. Ingber , Yaneer Bar-Yam

The coupling between evolutionary and ecological changes (eco-evolutionary dynamics) has been shown to be relevant among diverse species, and is also of interest outside of ecology, i.e. in cancer evolution. These dynamics play an important…

偏微分方程分析 · 数学 2026-01-21 Manh Hong Duong , Fabian Spill , Blaine van Rensburg

Speciation is fundamental to the huge diversity of life on Earth. Evidence suggests reproductive isolation arises most commonly in allopatry with a higher speciation rate in small populations. Current theory does not address this dependence…

种群与进化 · 定量生物学 2015-03-27 Bhavin S. Khatri , Richard A. Goldstein

Maintaining genetic diversity as a means to avoid premature convergence is critical in Genetic Programming. Several approaches have been proposed to achieve this, with some focusing on the mating phase from coupling dissimilar solutions to…

神经与进化计算 · 计算机科学 2023-03-31 José Maria Simões , Nuno Lourenço , Penousal Machado

Most of the DNA that composes a complex organism is non-coding and defined as junk. Even the coding part is composed of genes that affect the phenotype differently. Therefore, a random mutation has an effect on the specimen fitness that…

种群与进化 · 定量生物学 2021-07-19 Mattia Miotto , Lorenzo Monacelli

Ecological selection is a major driver of community assembly. Selection is classified as stabilizing when species with intermediate trait values gain the highest reproductive success, whereas selection is considered directional when fitness…

种群与进化 · 定量生物学 2021-05-13 DeMalach Niv , Po-Ju Ke , Tadashi Fukami

Speciation is often associated with geographical barriers that limit gene flow. However, species can also emerge in continuous homogeneous environments through isolation by distance. When the environment is not homogeneous, natural…

种群与进化 · 定量生物学 2026-03-24 Lara D. Hissa , Flavia M. D. Marquitti , Marcus A. M. de Aguiar

We consider the effect of network structure on the evolution of a population. Models of this kind typically consider a population of fixed size and distribution. Here we consider eco-evolutionary dynamics where population size and…

种群与进化 · 定量生物学 2023-04-05 Karan Pattni , Wajid Ali , Mark Broom , Kieran J Sharkey

Resource are often not uniformly distributed within a population. Spatial variations of concentration of a resource, change the fitness of competing strategies locally. The notion of fitness varying with respect to both genotype and…

种群与进化 · 定量生物学 2022-04-08 Hossein Nemati , Mohammad Reza Ejtehadi , Kamran Kaveh

We present an individual based model of evolutionary ecology. The reproduction rate of individuals characterized by their genome depends on the composition of the population in genotype space. Ecological features such as the taxonomy and…

统计力学 · 物理学 2016-08-31 Matt Hall , Kim Christensen , Simone A. di Collobiano , Henrik Jeldtoft Jensen
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