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Natural language processing (NLP) of clinical trial documents can be useful in new trial design. Here we identify entity types relevant to clinical trial design and propose a framework called CT-BERT for information extraction from clinical…

定量方法 · 定量生物学 2021-10-20 Xiong Liu , Greg L. Hersch , Iya Khalil , Murthy Devarakonda

Developing explainability methods for Natural Language Processing (NLP) models is a challenging task, for two main reasons. First, the high dimensionality of the data (large number of tokens) results in low coverage and in turn small…

计算与语言 · 计算机科学 2023-03-08 Peyman Jalali , Nengfeng Zhou , Yufei Yu

The rapidly evolving literature of COVID-19 related articles makes it challenging for NLP models to be effectively trained for information retrieval and extraction with the corresponding labeled data that follows the current distribution of…

信息检索 · 计算机科学 2021-06-16 Nima Ebadi , Peyman Najafirad

Driven by the visions of Data Science, recent years have seen a paradigm shift in Natural Language Processing (NLP). NLP has set the milestone in text processing and proved to be the preferred choice for researchers in the healthcare…

计算机与社会 · 计算机科学 2020-07-20 Ganga Prasad Basyal , Bhaskar P. Rimal , David Zeng

A long-running goal of the clinical NLP community is the extraction of important variables trapped in clinical notes. However, roadblocks have included dataset shift from the general domain and a lack of public clinical corpora and…

计算与语言 · 计算机科学 2022-12-01 Monica Agrawal , Stefan Hegselmann , Hunter Lang , Yoon Kim , David Sontag

Recent developments in large language models (LLMs) have been accompanied by rapidly growing public interest in natural language processing (NLP). This attention is reflected by major news venues, which sometimes invite NLP researchers to…

计算机与社会 · 计算机科学 2025-07-17 Shomir Wilson

Natural Language Processing (NLP) is an important branch of artificial intelligence that studies how to enable computers to understand, process, and generate human language. Text classification is a fundamental task in NLP, which aims to…

计算与语言 · 计算机科学 2024-03-18 Xiaonan Xu , Zheng Xu , Zhipeng Ling , Zhengyu Jin , ShuQian Du

Objective: This study aims to consider small graphs of concepts and exploit them for expressing graph searches over existing COVID-19-related literature, leveraging the increasing use of graphs to represent and query scientific knowledge…

信息检索 · 计算机科学 2024-06-25 Francesco Invernici , Anna Bernasconi , Stefano Ceri

Natural Language Processing (NLP) for low-resource languages remains fundamentally constrained by the lack of textual corpora, standardized orthographies, and scalable annotation pipelines. While recent advances in large language models…

计算与语言 · 计算机科学 2026-02-10 Bonaventure F. P. Dossou , Henri Aïdasso

Participant recruitment based on unstructured medical texts such as clinical notes and radiology reports has been a challenging yet important task for the cohort establishment in clinical research. Recently, Large Language Models (LLMs)…

计算与语言 · 计算机科学 2023-07-24 Zihan Guan , Zihao Wu , Zhengliang Liu , Dufan Wu , Hui Ren , Quanzheng Li , Xiang Li , Ninghao Liu

The Electronic Health Record (EHR) is an essential part of the modern medical system and impacts healthcare delivery, operations, and research. Unstructured text is attracting much attention despite structured information in the EHRs and…

计算与语言 · 计算机科学 2023-06-29 Irene Li , Keen You , Yujie Qiao , Lucas Huang , Chia-Chun Hsieh , Benjamin Rosand , Jeremy Goldwasser , Dragomir Radev

Electronic health records (EHRs), digital collections of patient healthcare events and observations, are ubiquitous in medicine and critical to healthcare delivery, operations, and research. Despite this central role, EHRs are notoriously…

Although Natural Language Processing (NLP) research on argument mining has advanced considerably in recent years, most studies draw on corpora of asynchronous and written texts, often produced by individuals. Few published corpora of…

计算与语言 · 计算机科学 2020-05-26 Christopher Olshefski , Luca Lugini , Ravneet Singh , Diane Litman , Amanda Godley

The Imaging Data Commons (IDC) is a cloud-based database that provides researchers with open access to cancer imaging data, with the goal of facilitating collaboration. However, cohort discovery within the IDC database has a significant…

机器学习 · 计算机科学 2023-11-28 Pranav Kulkarni , Adway Kanhere , Paul H. Yi , Vishwa S. Parekh

Recent advances in natural language processing (NLP) have produced general models that can perform complex tasks such as summarizing long passages and translating across languages. Here, we introduce a method to extract adjective…

计算与语言 · 计算机科学 2022-03-07 Andrew Cutler , David M. Condon

Objective: We investigate whether deep learning techniques for natural language processing (NLP) can be used efficiently for patient phenotyping. Patient phenotyping is a classification task for determining whether a patient has a medical…

Quantum Natural Language Processing (QNLP) deals with the design and implementation of NLP models intended to be run on quantum hardware. In this paper, we present results on the first NLP experiments conducted on Noisy Intermediate-Scale…

计算与语言 · 计算机科学 2023-05-05 Robin Lorenz , Anna Pearson , Konstantinos Meichanetzidis , Dimitri Kartsaklis , Bob Coecke

[Abridged Abstract] Recent technological advances underscore labor market dynamics, yielding significant consequences for employment prospects and increasing job vacancy data across platforms and languages. Aggregating such data holds…

计算与语言 · 计算机科学 2024-05-01 Mike Zhang

The past few years has seen the application of machine learning utilised in the exploration of new materials. As in many fields of research - the vast majority of knowledge is published as text, which poses challenges in either a…

计算与语言 · 计算机科学 2022-08-12 Shujing Zhao , Nick Birbilis

Natural Language Processing (NLP), a cornerstone field within artificial intelligence, has been increasingly utilized in the field of materials science literature. Our study conducts a reproducibility analysis of two pioneering works within…

化学物理 · 物理学 2023-08-01 Xiangyun Lei , Edward Kim , Viktoriia Baibakova , Shijing Sun